Gm46495 Pseudogene Detail

Summary

• Symbol
  Gm46495
• Name
  predicted gene, 46495

• Feature Type
  pseudogene
• IDs
  MGI:5826132
  NCBI Gene: 108168212
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:83422340-83422877 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5826132	pseudogene	Chr15:83417915-83424493 (-)
129S1/SvImJ	ENSMUSG00200053843	pseudogene	Chr15:80547982-80548519 (-)
A/J	ENSMUSG00195051653	pseudogene	Chr15:80474139-80474676 (-)
AKR/J	ENSMUSG00220053295	pseudogene	Chr15:80517813-80518350 (-)
BALB/cJ	ENSMUSG00180053889	pseudogene	Chr15:80351047-80351584 (-)
C3H/HeJ	ENSMUSG00175053423	pseudogene	Chr15:80661977-80662514 (-)
C57BL/6NJ	ENSMUSG00215053519	pseudogene	Chr15:80439970-80440507 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005049186	pseudogene	Chr15:79941625-79942162 (-)
CBA/J	ENSMUSG00210049598	pseudogene	Chr15:80436972-80437509 (-)
DBA/2J	ENSMUSG00185051950	pseudogene	Chr15:80470620-80471157 (-)
FVB/NJ	ENSMUSG00205052752	pseudogene	Chr15:80218934-80219471 (-)
JF1/MsJ	ENSUMUG00000056683	pseudogene	Chr15:80000311-80000849 (-)
LP/J	ENSMUSG00230046269	pseudogene	Chr15:83788317-83788854 (-)
NOD/ShiLtJ	ENSMUSG00190053868	pseudogene	Chr15:80454097-80454634 (-)
NZO/HlLtJ	ENSMUSG00225050446	pseudogene	Chr15:84121829-84122366 (-)
PWK/PhJ	ENSLUMG00010053104	pseudogene	Chr15:80203959-80204497 (-)
SPRET/EiJ	ENSMSPG00010050913	pseudogene	Chr15:81863491-81864029 (-)
WSB/EiJ	ENSIUOG00005050455	pseudogene	Chr15:80537329-80537866 (-)

Homology

• Gene Tree
  Gm46495
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000116217 (Evidence)
• NCBI Gene
  108168212

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116217	Ensembl Gene Model | MGI Sequence Detail	538	C57BL/6J
transcript	ENSMUST00000229232	Ensembl | MGI Sequence Detail	538	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;