Gm46455 Gene Detail

Summary

• Symbol
  Gm46455
• Name
  predicted gene, 46455

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:5826092
  NCBI Gene: 108168163
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:55407166-55414096 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  356 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5826092	lncRNA gene	Chr14:55392187-55417638 (+)
129S1/SvImJ	ENSMUSG00200043514	pseudogene	Chr14:43987128-43994058 (+)
A/J	ENSMUSG00195036611	pseudogene	Chr14:44211496-44218427 (+)
AKR/J	ENSMUSG00220037854	pseudogene	Chr14:43539413-43546343 (+)
BALB/cJ	ENSMUSG00180052175	pseudogene	Chr14:43835214-43842147 (+)
C3H/HeJ	ENSMUSG00175052463	pseudogene	Chr14:45517579-45524509 (+)
C57BL/6NJ	ENSMUSG00215050549	pseudogene	Chr14:43730316-43737247 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050644	pseudogene	Chr14:45514905-45521809 (+)
CBA/J	ENSMUSG00210046101	pseudogene	Chr14:44198094-44205024 (+)
DBA/2J	ENSMUSG00185055131	pseudogene	Chr14:49256916-49263847 (+)
FVB/NJ	ENSMUSG00205042664	pseudogene	Chr14:43594779-43601710 (+)
JF1/MsJ	ENSUMUG00000053952	pseudogene	Chr14:60495879-60502870 (+)
LP/J	ENSMUSG00230053063	pseudogene	Chr14:61353011-61359941 (+)
NOD/ShiLtJ	ENSMUSG00190048472	pseudogene	Chr14:43955666-43962596 (+)
NZO/HlLtJ	ENSMUSG00225046457	pseudogene	Chr14:51651113-51658044 (+)
PWK/PhJ	ENSLUMG00010050681	pseudogene	Chr14:43420845-43427775 (+)
SPRET/EiJ	ENSMSPG00010049150	pseudogene	Chr14:46816572-46823516 (+)
WSB/EiJ	ENSIUOG00005045527	pseudogene	Chr14:43419734-43426644 (+)

Homology

• Gene Tree
  Gm46455
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000115077 (Evidence)
• NCBI Gene
  108168163

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115077	Ensembl Gene Model | MGI Sequence Detail	6931	C57BL/6J
transcript	ENSMUST00000228176	Ensembl | MGI Sequence Detail	375	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;