Gm46453 Pseudogene Detail

Summary

• Symbol
  Gm46453
• Name
  predicted gene, 46453

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5826090
  NCBI Gene: 118568148
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:49071662-49072012 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5826090	pseudogene	Chr14:49071625-49072012 (-)
129S1/SvImJ	ENSMUSG00200017251	pseudogene	Chr14:37908789-37909155 (-)
A/J	ENSMUSG00195025165	pseudogene	Chr14:38114955-38115321 (-)
AKR/J	ENSMUSG00220040578	pseudogene	Chr14:37489368-37489734 (-)
BALB/cJ	ENSMUSG00180045141	pseudogene	Chr14:37723191-37723557 (-)
C3H/HeJ	ENSMUSG00175027679	pseudogene	Chr14:39403539-39403905 (-)
C57BL/6NJ	ENSMUSG00215038006	pseudogene	Chr14:38093752-38094118 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010620	pseudogene	Chr14:39896496-39896862 (-)
CBA/J	ENSMUSG00210044164	pseudogene	Chr14:38048676-38049042 (-)
DBA/2J	ENSMUSG00185056148	pseudogene	Chr14:42822618-42822984 (-)
FVB/NJ	ENSMUSG00205046313	pseudogene	Chr14:37254251-37254617 (-)
JF1/MsJ	ENSUMUG00000049105	pseudogene	Chr14:54869252-54869618 (-)
LP/J	ENSMUSG00230053233	pseudogene	Chr14:55078188-55078554 (-)
NOD/ShiLtJ	ENSMUSG00190041372	pseudogene	Chr14:37726778-37727144 (-)
NZO/HlLtJ	ENSMUSG00225052135	pseudogene	Chr14:45345236-45345602 (-)
PWK/PhJ	ENSLUMG00010043758	pseudogene	Chr14:37321355-37321721 (-)
SPRET/EiJ	ENSMSPG00010003692	pseudogene	Chr14:40667906-40668274 (-)
WSB/EiJ	ENSIUOG00005041357	pseudogene	Chr14:37617456-37617822 (-)

Homology

• Gene Tree
  Gm46453
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000115380 (Evidence)
• NCBI Gene
  118568148

Representative Sequences			Length	Strain/Species
genomic	118568148	NCBI Gene Model | MGI Sequence Detail	351	C57BL/6J
transcript	XM_036159010	RefSeq | MGI Sequence Detail	351	C57BL/6J
polypeptide	XP_036014903	RefSeq | MGI Sequence Detail	104	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;