Gm46443 Pseudogene Detail

Summary

• Symbol
  Gm46443
• Name
  predicted gene, 46443

• Feature Type
  pseudogene
• IDs
  MGI:5826080
  NCBI Gene: 115488346
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:23371212-23371575 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5826080	pseudogene	Chr14:23371170-23371578 (+)
129S1/SvImJ	ENSMUSG00200015381	pseudogene	Chr14:15173217-15173580 (+)
A/J	ENSMUSG00195022931	pseudogene	Chr14:16251656-16252019 (+)
AKR/J	ENSMUSG00220029132	pseudogene	Chr14:15362491-15362853 (+)
BALB/cJ	ENSMUSG00180041784	pseudogene	Chr14:15343610-15343973 (+)
C3H/HeJ	ENSMUSG00175024106	pseudogene	Chr14:15411408-15411771 (+)
C57BL/6NJ	ENSMUSG00215035554	pseudogene	Chr14:15650145-15650508 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033154	pseudogene	Chr14:15513346-15513709 (+)
CBA/J	ENSMUSG00210027528	pseudogene	Chr14:15646238-15646601 (+)
DBA/2J	ENSMUSG00185040133	pseudogene	Chr14:19931309-19931672 (+)
FVB/NJ	ENSMUSG00205040751	pseudogene	Chr14:15471459-15471822 (+)
JF1/MsJ	ENSUMUG00000050611	pseudogene	Chr14:27127300-27127662 (+)
LP/J	ENSMUSG00230041215	pseudogene	Chr14:27212901-27213264 (+)
NOD/ShiLtJ	ENSMUSG00190039991	pseudogene	Chr14:15633057-15633420 (+)
NZO/HlLtJ	ENSMUSG00225037719	pseudogene	Chr14:21430902-21431265 (+)
PWK/PhJ	ENSLUMG00010022400	pseudogene	Chr14:3772037-3772400 (+)
SPRET/EiJ	ENSMSPG00010034670	pseudogene	Chr14:17264707-17265070 (+)
WSB/EiJ	ENSIUOG00005033421	pseudogene	Chr14:15480083-15480446 (+)

Homology

• Gene Tree
  Gm46443
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000114803 (Evidence)
• NCBI Gene
  115488346

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114803	Ensembl Gene Model | MGI Sequence Detail	364	C57BL/6J
transcript	ENSMUST00000225611	Ensembl | MGI Sequence Detail	364	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;