Gm46339 Gene Detail

Summary

• Symbol
  Gm46339
• Name
  predicted gene, 46339

• Feature Type
  protein coding gene
• IDs
  MGI:5825976
  NCBI Gene: 108167986
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:19351654-19355192 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5825976	protein coding gene	Chr12:19351654-19355192 (+)
129S1/SvImJ	ENSMUSG00200024359	unclassified gene	Chr12:15323740-15327665 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006531	unclassified gene	Chr12:15617185-15617438 (-)
CBA/J	ENSMUSG00210008490	unclassified gene	Chr12:15625320-15629299 (-)
DBA/2J	ENSMUSG00185004057	unclassified gene	Chr12:16831632-16835254 (-)
FVB/NJ	ENSMUSG00205001724	unclassified gene	Chr12:16037047-16040851 (-)
JF1/MsJ	ENSUMUG00000009834	unclassified gene	Chr12:16252199-16255737 (+)
LP/J	ENSMUSG00230008302	unclassified gene	Chr12:21971278-21974900 (-)
LP/J	ENSMUSG00230007574	unclassified gene	Chr12:22351573-22355195 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225034912	unclassified gene	Chr12:26089893-26093515 (+)
NZO/HlLtJ	ENSMUSG00225035716	unclassified gene	Chr12:24173797-24177419 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005001809	unclassified gene	Chr12:15963831-15967203 (+)

Homology

• Gene Tree
  Gm46339
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00000113959 (Evidence)
• NCBI Gene
  108167986

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113959	Ensembl Gene Model | MGI Sequence Detail	3539	C57BL/6J
transcript	AK083827	GenBank | ENA | DDBJ | MGI Sequence Detail	3639	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;