Gm46312 Pseudogene Detail

Summary

• Symbol
  Gm46312
• Name
  predicted gene, 46312

• Feature Type
  pseudogene
• IDs
  MGI:5825949
  NCBI Gene: 108167954
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:18336170-18336541 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5825949	pseudogene	Chr12:18335573-18336541 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195019750	pseudogene	Chr12:15385869-15386831 (+)
A/J	ENSMUSG00195022287	pseudogene	Chr12:16783326-16784261 (+)
A/J	ENSMUSG00195022251	pseudogene	Chr12:16376118-16377086 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180010985	pseudogene	Chr12:16889383-16890351 (-)
BALB/cJ	ENSMUSG00180009861	pseudogene	Chr12:15397776-15398738 (+)
BALB/cJ	ENSMUSG00180010975	pseudogene	Chr12:16482256-16483191 (-)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185004260	pseudogene	Chr12:16297706-16298674 (-)
DBA/2J	ENSMUSG00185004529	pseudogene	Chr12:15880595-15881530 (-)
FVB/NJ	ENSMUSG00205001669	pseudogene	Chr12:15857274-15858244 (-)
FVB/NJ	ENSMUSG00205002182	pseudogene	Chr12:15436535-15437472 (-)
JF1/MsJ	ENSUMUG00000008504	pseudogene	Chr12:15231894-15232856 (+)
JF1/MsJ	ENSUMUG00000012437	pseudogene	Chr12:18560062-18560997 (-)
JF1/MsJ	ENSUMUG00000008317	pseudogene	Chr12:20497408-20498376 (-)
JF1/MsJ	ENSUMUG00000012558	pseudogene	Chr12:18985448-18986408 (-)
LP/J	ENSMUSG00230023333	pseudogene	Chr12:19039604-19040539 (-)
LP/J	ENSMUSG00230008280	pseudogene	Chr12:21437723-21438691 (-)
LP/J	ENSMUSG00230023317	pseudogene	Chr12:18123620-18124588 (+)
LP/J	ENSMUSG00230021777	pseudogene	Chr12:17137969-17138931 (+)
LP/J	ENSMUSG00230023349	pseudogene	Chr12:19457253-19458221 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225030229	pseudogene	Chr12:19242514-19243476 (+)
NZO/HlLtJ	ENSMUSG00225035654	pseudogene	Chr12:23640282-23641250 (-)
NZO/HlLtJ	ENSMUSG00225035515	pseudogene	Chr12:21561317-21562285 (-)
NZO/HlLtJ	ENSMUSG00225035495	pseudogene	Chr12:21144170-21145105 (-)
NZO/HlLtJ	ENSMUSG00225030452	pseudogene	Chr12:20228166-20229134 (+)
PWK/PhJ	ENSLUMG00010004460	pseudogene	Chr12:15026965-15027927 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm46312
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29

• Ensembl
  ENSMUSG00000112994 (Evidence)
• NCBI Gene
  108167954

Representative Sequences			Length	Strain/Species
genomic	108167954	NCBI Gene Model | MGI Sequence Detail	372	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;