Gm46223 Pseudogene Detail

Summary

• Symbol
  Gm46223
• Name
  predicted gene, 46223

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5825860
  NCBI Gene: 118567843
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:50298230-50298904 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  59

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5825860	pseudogene	Chr10:50297322-50302682 (-)
129S1/SvImJ	ENSMUSG00200032308	pseudogene	Chr12:46810305-46810977 (+)
129S1/SvImJ	ENSMUSG00200007386	pseudogene	Chr10:47183966-47184640 (-)
129S1/SvImJ	ENSMUSG00200054277	pseudogene	Chr15:73560807-73561479 (-)
A/J	ENSMUSG00195012124	pseudogene	Chr16:3791378-3792050 (-)
A/J	ENSMUSG00195019522	pseudogene	Chr10:38479836-38480508 (+)
A/J	ENSMUSG00195003131	pseudogene	Chr10:47461800-47462474 (-)
A/J	ENSMUSG00195003774	pseudogene	Chr4:32101398-32102070 (-)
A/J	ENSMUSG00195003352	pseudogene	Chr1:3437436-3438108 (+)
AKR/J	ENSMUSG00220006207	pseudogene	Chr10:47141875-47142549 (-)
AKR/J	ENSMUSG00220038831	pseudogene	Chr4:31895180-31895852 (-)
AKR/J	ENSMUSG00220018401	pseudogene	Chr16:72771832-72772504 (-)
BALB/cJ	ENSMUSG00180009625	pseudogene	Chr1:3514800-3515472 (+)
BALB/cJ	ENSMUSG00180011988	pseudogene	Chr10:47591564-47592238 (-)
BALB/cJ	ENSMUSG00180018073	pseudogene	Chr10:38564957-38565629 (+)
C3H/HeJ	ENSMUSG00175012906	pseudogene	Chr10:38359228-38359900 (+)
C3H/HeJ	ENSMUSG00175010106	pseudogene	Chr10:47332837-47333511 (-)
C3H/HeJ	ENSMUSG00175010029	pseudogene	Chr12:5136988-5137660 (+)
C3H/HeJ	ENSMUSG00175024584	pseudogene	Chr4:32082322-32082994 (-)
C57BL/6NJ	ENSMUSG00215036174	pseudogene	Chr13:94776383-94777056 (-)
C57BL/6NJ	ENSMUSG00215033865	pseudogene	Chr7:20084952-20085624 (+)
C57BL/6NJ	ENSMUSG00215002263	pseudogene	Chr10:47088439-47089113 (-)
C57BL/6NJ	ENSMUSG00215012006	pseudogene	Chr10:38108554-38109226 (+)
C57BL/6NJ	ENSMUSG00215022283	pseudogene	Chr12:47744521-47745193 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210028652	pseudogene	Chr7:20071252-20071924 (+)
CBA/J	ENSMUSG00210008242	pseudogene	Chr10:47235983-47236657 (-)
CBA/J	ENSMUSG00210026369	pseudogene	Chr10:38252692-38253364 (+)
CBA/J	ENSMUSG00210008364	pseudogene	Chr4:31802141-31802813 (-)
CBA/J	ENSMUSG00210013830	pseudogene	Chr12:5167777-5168449 (+)
DBA/2J	ENSMUSG00185006997	pseudogene	Chr4:31874554-31875226 (-)
DBA/2J	ENSMUSG00185003269	pseudogene	Chr10:47392147-47392821 (-)
DBA/2J	ENSMUSG00185052671	pseudogene	Chr15:73476250-73476922 (-)
DBA/2J	ENSMUSG00185035517	pseudogene	ChrX:49273697-49274369 (+)
DBA/2J	ENSMUSG00185008728	pseudogene	Chr10:38405346-38406018 (+)
FVB/NJ	ENSMUSG00205005688	pseudogene	Chr1:3576667-3577339 (+)
FVB/NJ	ENSMUSG00205015630	pseudogene	Chr10:38320499-38321171 (+)
FVB/NJ	ENSMUSG00205053234	pseudogene	Chr7:19851575-19852247 (+)
FVB/NJ	ENSMUSG00205031689	pseudogene	Chr4:31465786-31466458 (-)
FVB/NJ	ENSMUSG00205005402	pseudogene	Chr10:47285515-47286189 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230019553	pseudogene	Chr4:147522014-147522686 (-)
LP/J	ENSMUSG00230004079	pseudogene	Chr5:18336749-18337421 (-)
LP/J	ENSMUSG00230023163	pseudogene	Chr5:79348411-79349083 (+)
LP/J	ENSMUSG00230050668	pseudogene	Chr9:112012013-112012685 (+)
LP/J	ENSMUSG00230001983	pseudogene	Chr2:56053644-56054316 (-)
LP/J	ENSMUSG00230006545	pseudogene	Chr10:49193829-49194503 (-)
LP/J	ENSMUSG00230007243	pseudogene	ChrX:21307091-21307763 (+)
LP/J	ENSMUSG00230030897	pseudogene	ChrX:55803506-55804178 (+)
LP/J	ENSMUSG00230017234	pseudogene	Chr12:56887319-56887991 (+)
LP/J	ENSMUSG00230014461	pseudogene	Chr2:167243325-167243997 (+)
NOD/ShiLtJ	ENSMUSG00190005717	pseudogene	Chr10:47549237-47549911 (-)
NOD/ShiLtJ	ENSMUSG00190006595	pseudogene	Chr4:31797390-31798062 (-)
NOD/ShiLtJ	ENSMUSG00190036937	pseudogene	Chr10:38533526-38534198 (+)
NOD/ShiLtJ	ENSMUSG00190049962	pseudogene	Chr12:78768288-78768960 (-)
NOD/ShiLtJ	ENSMUSG00190042115	pseudogene	Chr17:9880826-9881498 (+)
NZO/HlLtJ	ENSMUSG00225018669	pseudogene	Chr5:46111382-46112053 (-)
NZO/HlLtJ	ENSMUSG00225022898	pseudogene	Chr10:53474748-53475422 (-)
NZO/HlLtJ	ENSMUSG00225004381	pseudogene	Chr1:100024990-100025662 (+)
PWK/PhJ	ENSLUMG00010040832	pseudogene	ChrX:87950318-87950736 (-)
SPRET/EiJ	ENSMSPG00010004810	pseudogene	Chr18:16821370-16822005 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm46223
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  64
• RefSeq
  2

• Ensembl
  ENSMUSG00000110720 (Evidence)
• NCBI Gene
  118567843

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110720	Ensembl Gene Model | MGI Sequence Detail	675	C57BL/6J
transcript	ENSMUST00000215196	Ensembl | MGI Sequence Detail	675	Not Applicable
polypeptide	XP_036012047	RefSeq | MGI Sequence Detail	344	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;