Gm46194 Pseudogene Detail

Summary

• Symbol
  Gm46194
• Name
  predicted gene, 46194

• Feature Type
  pseudogene
• IDs
  MGI:5825831
  NCBI Gene: 108167776
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:81845315-81845634 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  49 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5825831	pseudogene	Chr10:81845312-81845634 (-)
129S1/SvImJ	ENSMUSG00200050769	pseudogene	Chr10:78262046-78262365 (-)
A/J	ENSMUSG00195050634	pseudogene	Chr10:78708399-78708718 (-)
AKR/J	ENSMUSG00220049941	pseudogene	Chr10:78306063-78306382 (-)
BALB/cJ	ENSMUSG00180053436	pseudogene	Chr10:78718808-78719127 (-)
C3H/HeJ	ENSMUSG00175052815	pseudogene	Chr10:78589543-78589862 (-)
C57BL/6NJ	ENSMUSG00215053157	pseudogene	Chr10:78331485-78331804 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052131	pseudogene	Chr10:78081344-78081663 (-)
CBA/J	ENSMUSG00210050291	pseudogene	Chr10:78445589-78445908 (-)
DBA/2J	ENSMUSG00185054007	pseudogene	Chr10:78655132-78655451 (-)
FVB/NJ	ENSMUSG00205052159	pseudogene	Chr10:78372586-78372905 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230018896	pseudogene	Chr10:80557593-80557912 (-)
NOD/ShiLtJ	ENSMUSG00190052697	pseudogene	Chr10:78701641-78701960 (-)
NZO/HlLtJ	ENSMUSG00225052997	pseudogene	Chr10:84844086-84844405 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005051343	pseudogene	Chr10:78440111-78440430 (-)

Homology

• Gene Tree
  Gm46194
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000112502 (Evidence)
• NCBI Gene
  108167776

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112502	Ensembl Gene Model | MGI Sequence Detail	320	C57BL/6J
transcript	ENSMUST00000218136	Ensembl | MGI Sequence Detail	320	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;