Gm46190 Pseudogene Detail

Summary

• Symbol
  Gm46190
• Name
  predicted gene, 46190

• Feature Type
  pseudogene
• IDs
  MGI:5825827
  NCBI Gene: 108167771
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:55000458-55000884 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5825827	pseudogene	Chr10:55000430-55000884 (+)
129S1/SvImJ	ENSMUSG00200029397	pseudogene	Chr10:51912850-51913276 (+)
A/J	ENSMUSG00195028667	pseudogene	Chr10:52166123-52166549 (+)
AKR/J	ENSMUSG00220043144	pseudogene	Chr10:51862628-51863054 (+)
BALB/cJ	ENSMUSG00180029251	pseudogene	Chr10:52295627-52296053 (+)
C3H/HeJ	ENSMUSG00175026959	pseudogene	Chr10:52130689-52131115 (+)
C57BL/6NJ	ENSMUSG00215032314	pseudogene	Chr10:51818106-51818532 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030354	pseudogene	Chr10:51998428-51998854 (+)
CBA/J	ENSMUSG00210038748	pseudogene	Chr10:51944254-51944680 (+)
DBA/2J	ENSMUSG00185043580	pseudogene	Chr10:52096084-52096510 (+)
FVB/NJ	ENSMUSG00205037485	pseudogene	Chr10:52013845-52014271 (+)
JF1/MsJ	ENSUMUG00000023719	pseudogene	Chr10:51748167-51748595 (+)
LP/J	ENSMUSG00230023681	pseudogene	Chr10:53897383-53897809 (+)
NOD/ShiLtJ	ENSMUSG00190040129	pseudogene	Chr10:52267037-52267463 (+)
NZO/HlLtJ	ENSMUSG00225022688	pseudogene	Chr10:58178325-58178751 (+)
PWK/PhJ	ENSLUMG00010024507	pseudogene	Chr10:51937914-51938340 (+)
SPRET/EiJ	ENSMSPG00010027673	pseudogene	Chr10:53400621-53401049 (+)
WSB/EiJ	ENSIUOG00005043367	pseudogene	Chr10:51929351-51929777 (+)

Homology

• Gene Tree
  Gm46190
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000112755 (Evidence)
• NCBI Gene
  108167771

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112755	Ensembl Gene Model | MGI Sequence Detail	427	C57BL/6J
transcript	ENSMUST00000219650	Ensembl | MGI Sequence Detail	427	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;