Gm46138 Pseudogene Detail

Summary

• Symbol
  Gm46138
• Name
  predicted gene, 46138

• Feature Type
  pseudogene
• IDs
  MGI:5825775
  NCBI Gene: 108167698
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:78674389-78674814 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5825775	pseudogene	Chr9:78674389-78674814 (-)
129S1/SvImJ	ENSMUSG00200019723	pseudogene	Chr9:75817650-75818075 (-)
A/J	ENSMUSG00195010712	pseudogene	Chr9:75604415-75604840 (-)
AKR/J	ENSMUSG00220015123	pseudogene	Chr9:75710711-75711136 (-)
BALB/cJ	ENSMUSG00180018940	pseudogene	Chr9:75717950-75718375 (-)
C3H/HeJ	ENSMUSG00175012139	pseudogene	Chr9:75776769-75777194 (-)
C57BL/6NJ	ENSMUSG00215020866	pseudogene	Chr9:75661602-75662027 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009461	pseudogene	Chr9:75356836-75357261 (-)
CBA/J	ENSMUSG00210013432	pseudogene	Chr9:75809671-75810096 (-)
DBA/2J	ENSMUSG00185007863	pseudogene	Chr9:75838013-75838438 (-)
FVB/NJ	ENSMUSG00205033400	pseudogene	Chr9:75998783-75999208 (-)
JF1/MsJ	ENSUMUG00000039725	pseudogene	Chr9:75749900-75750325 (-)
LP/J	ENSMUSG00230025704	pseudogene	Chr9:75969200-75969625 (-)
NOD/ShiLtJ	ENSMUSG00190034270	pseudogene	Chr9:75914097-75914522 (-)
NZO/HlLtJ	ENSMUSG00225025555	pseudogene	Chr9:76135941-76136366 (-)
PWK/PhJ	ENSLUMG00010016798	pseudogene	Chr9:75682237-75682662 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005026113	pseudogene	Chr9:75248926-75249351 (-)

Homology

• Gene Tree
  Gm46138
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000110809 (Evidence)
• NCBI Gene
  108167698

Representative Sequences			Length	Strain/Species
genomic	108167698	NCBI Gene Model | MGI Sequence Detail	426	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;