Gm45674 Pseudogene Detail

Summary

• Symbol
  Gm45674
• Name
  predicted gene 45674

• Feature Type
  pseudogene
• IDs
  MGI:5791510
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:45621836-45623414 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  224 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5791510	pseudogene	Chr7:45621836-45623414 (+)
129S1/SvImJ	ENSMUSG00200033853	pseudogene	Chr7:33226946-33228533 (+)
A/J	ENSMUSG00195051611	pseudogene	Chr7:37254340-37255928 (+)
AKR/J	ENSMUSG00220009059	pseudogene	Chr7:31551024-31552602 (+)
BALB/cJ	ENSMUSG00180042596	pseudogene	Chr7:34129749-34131337 (+)
C3H/HeJ	ENSMUSG00175040656	pseudogene	Chr7:34662884-34664471 (+)
C57BL/6NJ	ENSMUSG00215047198	pseudogene	Chr7:33914724-33916302 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048910	pseudogene	Chr7:37644950-37646489 (+)
CBA/J	ENSMUSG00210049586	pseudogene	Chr7:35025682-35027260 (+)
DBA/2J	ENSMUSG00185048730	pseudogene	Chr7:38909657-38911244 (+)
FVB/NJ	ENSMUSG00205049220	pseudogene	Chr7:34570245-34571823 (+)
JF1/MsJ	ENSUMUG00000053926	pseudogene	Chr7:43389461-43391048 (+)
LP/J	ENSMUSG00230051868	pseudogene	Chr7:44344482-44346017 (+)
NOD/ShiLtJ	ENSMUSG00190051580	pseudogene	Chr7:34897944-34899522 (+)
NZO/HlLtJ	ENSMUSG00225018512	pseudogene	Chr7:42542852-42544440 (+)
PWK/PhJ	ENSLUMG00010049897	pseudogene	Chr7:33861044-33862631 (+)
SPRET/EiJ	ENSMSPG00010047033	pseudogene	Chr7:33633655-33635248 (+)
WSB/EiJ	ENSIUOG00005031880	pseudogene	Chr7:35446865-35448453 (+)

Homology

• Gene Tree
  Gm45674
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000109702 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109702	Ensembl Gene Model | MGI Sequence Detail	1579	C57BL/6J
transcript	ENSMUST00000210043	Ensembl | MGI Sequence Detail	450	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;