Gm45444 Gene Detail

Summary

• Symbol
  Gm45444
• Name
  predicted gene 45444

• Feature Type
  unclassified gene
• IDs
  MGI:5791280
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr7:45463446-45464343 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5791280	unclassified gene	Chr7:45463446-45464343 (+)
129S1/SvImJ	ENSMUSG00200032322	unclassified gene	Chr7:33066213-33067109 (+)
A/J	ENSMUSG00195049352	unclassified gene	Chr7:37094175-37095073 (+)
AKR/J	ENSMUSG00220009371	unclassified gene	Chr7:31392656-31393553 (+)
BALB/cJ	ENSMUSG00180044649	unclassified gene	Chr7:33969578-33970476 (+)
C3H/HeJ	ENSMUSG00175043851	unclassified gene	Chr7:34502143-34503039 (+)
C57BL/6NJ	ENSMUSG00215045779	unclassified gene	Chr7:33756325-33757222 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048523	unclassified gene	Chr7:37500363-37501259 (+)
CBA/J	ENSMUSG00210050486	unclassified gene	Chr7:34867299-34868196 (+)
DBA/2J	ENSMUSG00185050827	unclassified gene	Chr7:38748939-38749835 (+)
FVB/NJ	ENSMUSG00205049163	unclassified gene	Chr7:34411899-34412796 (+)
JF1/MsJ	ENSUMUG00000053910	unclassified gene	Chr7:43228679-43229575 (+)
LP/J	ENSMUSG00230051849	unclassified gene	Chr7:44183697-44184595 (+)
NOD/ShiLtJ	ENSMUSG00190050735	unclassified gene	Chr7:34739583-34740480 (+)
NZO/HlLtJ	ENSMUSG00225018733	unclassified gene	Chr7:42382991-42383889 (+)
PWK/PhJ	ENSLUMG00010051237	unclassified gene	Chr7:33702107-33703003 (+)
SPRET/EiJ	ENSMSPG00010046790	unclassified gene	Chr7:33471343-33472238 (+)
WSB/EiJ	ENSIUOG00005029660	unclassified gene	Chr7:35287423-35288320 (+)

Homology

• Gene Tree
  Gm45444
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000110197 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110197	Ensembl Gene Model | MGI Sequence Detail	898	C57BL/6J

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;

TSS for Gm45444:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr66642	Chr7:45463412-45463424 (+)	-28 bp
Tssr66643	Chr7:45463449-45463460 (+)	9 bp