Gm45222 Gene Detail

Summary

• Symbol
  Gm45222
• Name
  predicted gene 45222

• Feature Type
  unclassified gene
• IDs
  MGI:5753798
• Alliance
  genome feature page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr7:89795156-89799462 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753798	unclassified gene	Chr7:89795156-89799462 (+)
129S1/SvImJ	ENSMUSG00200029283	unclassified gene	Chr7:76558193-76562499 (+)
A/J	ENSMUSG00195042953	unclassified gene	Chr7:81088384-81093299 (+)
AKR/J	ENSMUSG00220044324	unclassified gene	Chr7:74559431-74564346 (+)
BALB/cJ	ENSMUSG00180040375	unclassified gene	Chr7:77764703-77769618 (+)
C3H/HeJ	ENSMUSG00175038972	unclassified gene	Chr7:78454548-78459462 (+)
C57BL/6NJ	ENSMUSG00215032015	unclassified gene	Chr7:77630903-77635209 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032557	unclassified gene	Chr7:81064044-81068918 (+)
CBA/J	ENSMUSG00210044208	unclassified gene	Chr7:78296481-78301395 (+)
DBA/2J	ENSMUSG00185032611	unclassified gene	Chr7:82626084-82630998 (+)
FVB/NJ	ENSMUSG00205034789	unclassified gene	Chr7:78235943-78240860 (+)
JF1/MsJ	ENSUMUG00000021580	unclassified gene	Chr7:87561438-87566335 (+)
LP/J	ENSMUSG00230018573	unclassified gene	Chr7:88715518-88720432 (+)
NOD/ShiLtJ	ENSMUSG00190029532	unclassified gene	Chr7:78509044-78513959 (+)
NZO/HlLtJ	ENSMUSG00225011826	unclassified gene	Chr7:86990320-86995234 (+)
PWK/PhJ	ENSLUMG00010041095	unclassified gene	Chr7:76765394-76770305 (+)
SPRET/EiJ	ENSMSPG00010013085	unclassified gene	Chr7:77810087-77814986 (+)
WSB/EiJ	ENSIUOG00005035435	unclassified gene	Chr7:78887362-78892276 (+)

Homology

• Gene Tree
  Gm45222
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000109498 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109498	Ensembl Gene Model | MGI Sequence Detail	4307	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm45222:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr67706	Chr7:89793946-89793972 (+)	-1,197 bp
Tssr67707	Chr7:89795994-89796012 (+)	847 bp
Tssr67708	Chr7:89796190-89796213 (+)	1,046 bp
Tssr67709	Chr7:89796266-89796284 (+)	1,119 bp
Tssr67710	Chr7:89798239-89798243 (+)	3,085 bp