Gm45177 Gene Detail

Summary

• Symbol
  Gm45177
• Name
  predicted gene 45177

• Feature Type
  unclassified gene
• IDs
  MGI:5753753
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:90789172-90791478 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  220 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753753	unclassified gene	Chr7:90789172-90791478 (+)
129S1/SvImJ	ENSMUSG00200028078	unclassified gene	Chr7:77580133-77582430 (+)
A/J	ENSMUSG00195040735	unclassified gene	Chr7:82073377-82075683 (+)
AKR/J	ENSMUSG00220044601	unclassified gene	Chr7:75547169-75549475 (+)
BALB/cJ	ENSMUSG00180039369	unclassified gene	Chr7:78749546-78751852 (+)
C3H/HeJ	ENSMUSG00175038357	unclassified gene	Chr7:79445285-79447595 (+)
C57BL/6NJ	ENSMUSG00215028211	unclassified gene	Chr7:78627925-78630231 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032859	unclassified gene	Chr7:82052323-82054658 (+)
CBA/J	ENSMUSG00210043038	unclassified gene	Chr7:79287117-79289425 (+)
DBA/2J	ENSMUSG00185032327	unclassified gene	Chr7:83616855-83619166 (+)
FVB/NJ	ENSMUSG00205035597	unclassified gene	Chr7:79245634-79247942 (+)
JF1/MsJ	ENSUMUG00000020551	unclassified gene	Chr7:88571706-88573978 (+)
LP/J	ENSMUSG00230018747	unclassified gene	Chr7:89706035-89708341 (+)
NOD/ShiLtJ	ENSMUSG00190033932	unclassified gene	Chr7:79493872-79496178 (+)
NZO/HlLtJ	ENSMUSG00225011891	unclassified gene	Chr7:87981015-87983325 (+)
PWK/PhJ	ENSLUMG00010040078	unclassified gene	Chr7:77782193-77784477 (+)
SPRET/EiJ	ENSMSPG00010014062	unclassified gene	Chr7:78843239-78845008 (+)
WSB/EiJ	ENSIUOG00005036325	unclassified gene	Chr7:79947873-79950179 (+)

Homology

• Gene Tree
  Gm45177
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000108819 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108819	Ensembl Gene Model | MGI Sequence Detail	2307	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm45177:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr67789	Chr7:90787505-90787518 (+)	-1,660 bp