Gm45052 Gene Detail

Summary

• Symbol
  Gm45052
• Name
  predicted gene 45052

• Feature Type
  lncRNA gene
• IDs
  MGI:5753628
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:63611988-63617492 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753628	lncRNA gene	Chr7:63611988-63617492 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007178	lincRNA gene	Chr7:65084379-65092225 (+)
A/J	MGP_AJ_G0007174	lincRNA gene	Chr7:63837820-63843291 (+)
AKR/J	MGP_AKRJ_G0007144	lincRNA gene	Chr7:65188132-65193471 (+)
BALB/cJ	MGP_BALBcJ_G0007153	lincRNA gene	Chr7:63575366-63580394 (+)
C3H/HeJ	MGP_C3HHeJ_G0007096	lincRNA gene	Chr7:65834780-65840131 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007322	lincRNA gene	Chr7:67890379-67897802 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006533	lincRNA gene	Chr7:66794300-66799939 (+)
CAST/EiJ	MGP_CASTEiJ_G0006999	lincRNA gene	Chr7:56499994-56507017 (+)
CBA/J	MGP_CBAJ_G0007079	lincRNA gene	Chr7:70073187-70078538 (+)
DBA/2J	MGP_DBA2J_G0007100	lincRNA gene	Chr7:62574659-62580107 (+)
FVB/NJ	MGP_FVBNJ_G0007123	lincRNA gene	Chr7:62674898-62680402 (+)
LP/J	MGP_LPJ_G0007182	lincRNA gene	Chr7:66317818-66326362 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007100	lincRNA gene	Chr7:70361175-70370547 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007325	lincRNA gene	Chr7:64450830-64456181 (+)
PWK/PhJ	MGP_PWKPhJ_G0006941	lincRNA gene	Chr7:55581648-55587162 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0007060	lincRNA gene	Chr7:64836416-64841889 (+)

Homology

• Gene Tree
  Gm45052
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  3
• Genomic Mutations
  3 involving Gm45052
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000108313 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108313	Ensembl Gene Model | MGI Sequence Detail	5505	C57BL/6J
transcript	ENSMUST00000206457	Ensembl | MGI Sequence Detail	405	Not Applicable

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 6
• Earliest
  J:260165 Fejgin K, et al., A mouse model that recapitulates cardinal features of the 15q13.3 microdeletion syndrome including schizophrenia- and epilepsy-related alterations. Biol Psychiatry. 2014 Jul 15;76(2):128-37
• Latest
  J:348102 Unda BK, et al., Impaired OTUD7A-dependent Ankyrin regulation mediates neuronal dysfunction in mouse and human models of the 15q13.3 microdeletion syndrome. Mol Psychiatry. 2023 Apr;28(4):1747-1769