Gm44686 Gene Detail

Summary

• Symbol
  Gm44686
• Name
  predicted gene 44686

• Feature Type
  lncRNA gene
• IDs
  MGI:5753262
• Alliance
  genome feature page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr7:73187636-73204576 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  405 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753262	lncRNA gene	Chr7:73187636-73204576 (+)
129S1/SvImJ	ENSMUSG00200012952	lncRNA gene	Chr7:59953456-59970238 (+)
A/J	ENSMUSG00195014335	lncRNA gene	Chr7:64347614-64364396 (+)
AKR/J	ENSMUSG00220020581	lncRNA gene	Chr7:57893999-57910785 (+)
BALB/cJ	ENSMUSG00180013378	lncRNA gene	Chr7:61056721-61073505 (+)
C3H/HeJ	ENSMUSG00175022209	lncRNA gene	Chr7:61854496-61871274 (+)
C57BL/6NJ	ENSMUSG00215028238	lncRNA gene	Chr7:60988655-61005444 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004032	antisense lncRNA gene	Chr7:76047788-76064584 (+)
CAST/EiJ	ENSTCUG00005004398	lncRNA gene	Chr7:64478074-64494822 (+)
CBA/J	ENSMUSG00210024283	lncRNA gene	Chr7:61713203-61729999 (+)
DBA/2J	ENSMUSG00185001612	lncRNA gene	Chr7:66035946-66052738 (+)
FVB/NJ	ENSMUSG00205028788	lncRNA gene	Chr7:61685094-61702356 (+)
JF1/MsJ	ENSUMUG00000034565	lncRNA gene	Chr7:70765392-70782200 (+)
LP/J	ENSMUSG00230015775	lncRNA gene	Chr7:72090651-72107435 (+)
NOD/ShiLtJ	ENSMUSG00190019371	lncRNA gene	Chr7:61808410-61825191 (+)
NZO/HlLtJ	ENSMUSG00225018100	lncRNA gene	Chr7:70358473-70375260 (+)
PWK/PhJ	ENSLUMG00010018998	lncRNA gene	Chr7:60310792-60327574 (+)
SPRET/EiJ	ENSMSPG00010024082	lncRNA gene	Chr7:60733477-60750124 (+)
WSB/EiJ	ENSIUOG00005021780	lncRNA gene	Chr7:62175574-62192342 (+)

Homology

• Gene Tree
  Gm44686
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000108563 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108563	Ensembl Gene Model | MGI Sequence Detail	16941	C57BL/6J
transcript	ENSMUST00000206776	Ensembl | MGI Sequence Detail	692	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm44686:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr67202	Chr7:73187695-73187718 (+)	71 bp
Tssr67203	Chr7:73187759-73187806 (+)	147 bp
Tssr67204	Chr7:73187812-73187840 (+)	190 bp
Tssr67205	Chr7:73189112-73189126 (+)	1,483 bp