Gm44650 Pseudogene Detail

Summary

• Symbol
  Gm44650
• Name
  predicted gene 44650

• Feature Type
  pseudogene
• IDs
  MGI:5753226
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:127931532-127931725 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  37 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753226	pseudogene	Chr7:127931532-127931725 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040659	pseudogene	Chr7:132751251-132751444 (+)
A/J	MGP_AJ_G0040656	pseudogene	Chr7:129177102-129177295 (+)
AKR/J	MGP_AKRJ_G0040585	pseudogene	Chr7:132557369-132557562 (+)
BALB/cJ	MGP_BALBcJ_G0040647	pseudogene	Chr7:128844277-128844470 (+)
C3H/HeJ	MGP_C3HHeJ_G0040281	pseudogene	Chr7:132445791-132445984 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041343	pseudogene	Chr7:137927838-137928031 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037483	pseudogene	Chr7:130356834-130357027 (+)
CAST/EiJ	MGP_CASTEiJ_G0039325	pseudogene	Chr7:124232388-124232581 (+)
CBA/J	MGP_CBAJ_G0040252	pseudogene	Chr7:142642123-142642316 (+)
DBA/2J	MGP_DBA2J_G0040464	pseudogene	Chr7:127165870-127166063 (+)
FVB/NJ	MGP_FVBNJ_G0040388	pseudogene	Chr7:127034790-127034983 (+)
LP/J	MGP_LPJ_G0040502	pseudogene	Chr7:134231625-134231818 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040380	pseudogene	Chr7:143660540-143660733 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041390	pseudogene	Chr7:131524891-131525084 (+)
PWK/PhJ	MGP_PWKPhJ_G0038983	pseudogene	Chr7:120180608-120180801 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038691	pseudogene	Chr7:118329764-118329957 (+)
WSB/EiJ	MGP_WSBEiJ_G0039577	pseudogene	Chr7:132500644-132500837 (+)

Homology

• Gene Tree
  Gm44650
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108636 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108636	Ensembl Gene Model | MGI Sequence Detail	194	C57BL/6J
transcript	ENSMUST00000206929	Ensembl | MGI Sequence Detail	194	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;