Gm44649 Gene Detail

Summary

• Symbol
  Gm44649
• Name
  predicted gene 44649

• Feature Type
  lncRNA gene
• IDs
  MGI:5753225
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:80401558-80408373 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  296 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753225	lncRNA gene	Chr7:80401558-80408373 (+)
129S1/SvImJ	ENSMUSG00200035725	lncRNA gene	Chr7:67221312-67227987 (+)
A/J	ENSMUSG00195042036	lncRNA gene	Chr7:71637773-71644447 (+)
AKR/J	ENSMUSG00220040217	lncRNA gene	Chr7:65179811-65186482 (+)
BALB/cJ	ENSMUSG00180013748	lncRNA gene	Chr7:68362915-68369586 (+)
C3H/HeJ	ENSMUSG00175022864	lncRNA gene	Chr7:69133375-69140048 (+)
C57BL/6NJ	ENSMUSG00215031746	lncRNA gene	Chr7:68228926-68235660 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004044	antisense lncRNA gene	Chr7:83322033-83328683 (+)
CAST/EiJ	ENSTCUG00005046138	lncRNA gene	Chr7:71684162-71690935 (+)
CBA/J	ENSMUSG00210024065	lncRNA gene	Chr7:68984609-68991282 (+)
DBA/2J	ENSMUSG00185047498	lncRNA gene	Chr7:73307405-73314078 (+)
FVB/NJ	ENSMUSG00205030447	lncRNA gene	Chr7:68870975-68877650 (+)
JF1/MsJ	ENSUMUG00000032717	lncRNA gene	Chr7:77969941-77976594 (+)
LP/J	ENSMUSG00230016505	lncRNA gene	Chr7:79396877-79403550 (+)
NOD/ShiLtJ	ENSMUSG00190020411	lncRNA gene	Chr7:69124570-69131243 (+)
NZO/HlLtJ	ENSMUSG00225042615	lncRNA gene	Chr7:77639815-77646486 (+)
PWK/PhJ	ENSLUMG00010018288	lncRNA gene	Chr7:67567071-67573711 (+)
SPRET/EiJ	ENSMSPG00010027392	lncRNA gene	Chr7:67968703-67975290 (+)
WSB/EiJ	ENSIUOG00005023544	lncRNA gene	Chr7:69472897-69479624 (+)

Homology

• Gene Tree
  Gm44649
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  42

• Ensembl
  ENSMUSG00000108321 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108321	Ensembl Gene Model | MGI Sequence Detail	6816	C57BL/6J
transcript	ENSMUST00000367849	Ensembl | MGI Sequence Detail	909	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm44649:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr2313	Chr7:80401588-80401595 (+)	34 bp