Gm44242 Gene Detail

Summary

• Symbol
  Gm44242
• Name
  predicted gene, 44242

• Feature Type
  unclassified gene
• IDs
  MGI:5690634
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:80491577-80494297 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  244 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690634	unclassified gene	Chr6:80491577-80494297 (+)
129S1/SvImJ	ENSMUSG00200013034	unclassified gene	Chr6:77449276-77451990 (+)
A/J	ENSMUSG00195012593	unclassified gene	Chr6:77161278-77163994 (+)
AKR/J	ENSMUSG00220002015	unclassified gene	Chr6:76103077-76105768 (+)
BALB/cJ	ENSMUSG00180010515	unclassified gene	Chr6:77537434-77540150 (+)
C3H/HeJ	ENSMUSG00175039235	unclassified gene	Chr6:99894878-99897598 (-)
C57BL/6NJ	ENSMUSG00215015143	unclassified gene	Chr6:77501436-77504160 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001720	unclassified gene	Chr6:76807349-76810066 (+)
CAST/EiJ	ENSTCUG00005008604	unclassified gene	Chr6:77565266-77567984 (+)
CBA/J	ENSMUSG00210011470	unclassified gene	Chr6:77322561-77325277 (+)
DBA/2J	ENSMUSG00185001132	unclassified gene	Chr6:77875405-77878127 (+)
FVB/NJ	ENSMUSG00205028659	unclassified gene	Chr6:76590947-76593663 (+)
JF1/MsJ	ENSUMUG00000021789	unclassified gene	Chr6:76922663-76925382 (+)
LP/J	ENSMUSG00230007759	unclassified gene	Chr6:79005069-79007787 (+)
NOD/ShiLtJ	ENSMUSG00190002252	unclassified gene	Chr6:76978558-76981272 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010006966	unclassified gene	Chr6:76326460-76329189 (+)
SPRET/EiJ	ENSMSPG00010000424	unclassified gene	Chr6:78367608-78370345 (+)
WSB/EiJ	ENSIUOG00005018567	unclassified gene	Chr6:77885368-77888065 (+)

Homology

• Gene Tree
  Gm44242
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm44242
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000107826 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107826	Ensembl Gene Model | MGI Sequence Detail	2721	C57BL/6J

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48

TSS for Gm44242:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr57245	Chr6:80494227-80494247 (+)	2,660 bp