Gm44239 Pseudogene Detail

Summary

• Symbol
  Gm44239
• Name
  predicted gene, 44239

• Feature Type
  pseudogene
• IDs
  MGI:5690631
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:133356347-133357982 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690631	pseudogene	Chr6:133356347-133357982 (-)
129S1/SvImJ	ENSMUSG00200046999	pseudogene	Chr6:130861677-130863312 (-)
A/J	ENSMUSG00195034302	pseudogene	Chr6:129423093-129424726 (-)
AKR/J	ENSMUSG00220041087	pseudogene	Chr6:128344133-128345766 (-)
BALB/cJ	ENSMUSG00180038452	pseudogene	Chr6:129490644-129492277 (-)
C3H/HeJ	ENSMUSG00175041208	pseudogene	Chr6:129440087-129441720 (-)
C57BL/6NJ	ENSMUSG00215033600	pseudogene	Chr6:129975729-129977364 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042854	pseudogene	Chr6:130294552-130296186 (-)
CBA/J	ENSMUSG00210017124	pseudogene	Chr6:129459472-129461105 (-)
DBA/2J	ENSMUSG00185045008	pseudogene	Chr6:130158108-130159741 (-)
FVB/NJ	ENSMUSG00205036734	pseudogene	Chr6:129038979-129040614 (-)
JF1/MsJ	ENSUMUG00000045068	pseudogene	Chr6:128846584-128848218 (-)
LP/J	ENSMUSG00230045935	pseudogene	Chr6:131356836-131358469 (-)
NOD/ShiLtJ	ENSMUSG00190044997	pseudogene	Chr6:130305241-130306876 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010045670	pseudogene	Chr6:127974720-127976551 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005046008	pseudogene	Chr6:130556572-130558207 (-)

Homology

• Gene Tree
  Gm44239
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000107527 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107527	Ensembl Gene Model | MGI Sequence Detail	1636	C57BL/6J
transcript	ENSMUST00000204228	Ensembl | MGI Sequence Detail	271	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm44239:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr63706	Chr6:133358014-133358021 (-)	-36 bp