Gm44238 Gene Detail

Summary

• Symbol
  Gm44238
• Name
  predicted gene, 44238

• Feature Type
  lncRNA gene
• IDs
  MGI:5690630
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:134897789-134907286 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  201 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690630	lncRNA gene	Chr6:134897789-134907286 (-)
129S1/SvImJ	ENSMUSG00200033582	lncRNA gene	Chr6:132402752-132403878 (-)
A/J	ENSMUSG00195032569	lncRNA gene	Chr6:131262509-131263634 (-)
AKR/J	ENSMUSG00220040378	lncRNA gene	Chr6:129486921-129488045 (-)
BALB/cJ	ENSMUSG00180041062	lncRNA gene	Chr6:131334817-131335942 (-)
C3H/HeJ	ENSMUSG00175042519	lncRNA gene	Chr6:131282877-131284001 (-)
C57BL/6NJ	ENSMUSG00215034372	lncRNA gene	Chr6:131525686-131526807 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006442	lincRNA gene	Chr6:132907958-132909071 (-)
CAST/EiJ	ENSTCUG00005042228	lncRNA gene	Chr6:132190257-132191378 (-)
CBA/J	ENSMUSG00210017246	lncRNA gene	Chr6:131301309-131302433 (-)
DBA/2J	ENSMUSG00185023446	lncRNA gene	Chr6:131997516-131998640 (-)
FVB/NJ	ENSMUSG00205043802	lncRNA gene	Chr6:130426047-130427172 (-)
JF1/MsJ	ENSUMUG00000047753	lncRNA gene	Chr6:130741888-130743008 (-)
LP/J	ENSMUSG00230010158	lncRNA gene	Chr6:133198597-133199722 (-)
NOD/ShiLtJ	ENSMUSG00190043798	lncRNA gene	Chr6:131835761-131836885 (-)
NZO/HlLtJ	ENSMUSG00225007687	lncRNA gene	Chr6:136054338-136055464 (-)
PWK/PhJ	ENSLUMG00010042537	lncRNA gene	Chr6:129794931-129796052 (-)
SPRET/EiJ	ENSMSPG00010036883	lncRNA gene	Chr6:133591596-133592723 (-)
WSB/EiJ	ENSIUOG00005048223	lncRNA gene	Chr6:132097402-132098527 (-)

Homology

• Gene Tree
  Gm44238
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000107730 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107730	Ensembl Gene Model | MGI Sequence Detail	9498	C57BL/6J
transcript	ENSMUST00000273514	Ensembl | MGI Sequence Detail	708	Not Applicable

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm44238:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr63744	Chr6:134905408-134905426 (-)	1,869 bp