Gm44126 Pseudogene Detail

Summary

• Symbol
  Gm44126
• Name
  predicted gene, 44126

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5690518
  NCBI Gene: 118567384
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:76261399-76261912 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690518	pseudogene	Chr6:76261235-76261912 (+)
129S1/SvImJ	ENSMUSG00200013166	pseudogene	Chr6:73156825-73156847 (+)
A/J	ENSMUSG00195012689	pseudogene	Chr6:72863084-72863597 (+)
AKR/J	ENSMUSG00220002091	pseudogene	Chr6:71894171-71894684 (+)
BALB/cJ	ENSMUSG00180010139	pseudogene	Chr6:73264899-73265412 (+)
C3H/HeJ	ENSMUSG00175014067	pseudogene	Chr6:104166523-104167036 (-)
C57BL/6NJ	ENSMUSG00215016512	pseudogene	Chr6:73262597-73263110 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010214	pseudogene	Chr17:69129022-69131691 (-)
CAST/EiJ	ENSTCUG00005008716	pseudogene	Chr6:73421404-73421434 (+)
CBA/J	ENSMUSG00210011749	pseudogene	Chr6:73077626-73078139 (+)
DBA/2J	ENSMUSG00185001049	pseudogene	Chr6:73634168-73634681 (+)
FVB/NJ	ENSMUSG00205026981	pseudogene	Chr6:72342756-72343269 (+)
JF1/MsJ	ENSUMUG00000024528	pseudogene	Chr6:72746052-72746074 (+)
LP/J	ENSMUSG00230008262	pseudogene	Chr6:74732242-74732264 (+)
NOD/ShiLtJ	ENSMUSG00190001740	pseudogene	Chr6:72716706-72716728 (+)
NZO/HlLtJ	ENSMUSG00225007065	pseudogene	Chr6:76743628-76743650 (+)
PWK/PhJ	ENSLUMG00010007048	pseudogene	Chr6:72148285-72148326 (+)
SPRET/EiJ	ENSMSPG00010000435	pseudogene	Chr6:74046356-74046383 (+)
WSB/EiJ	ENSIUOG00005019040	pseudogene	Chr6:73668885-73668907 (+)

Homology

• Gene Tree
  Gm44126
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm44126
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000107770 (Evidence)
• NCBI Gene
  118567384

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107770	Ensembl Gene Model | MGI Sequence Detail	514	C57BL/6J
transcript	ENSMUST00000204831	Ensembl | MGI Sequence Detail	514	Not Applicable
polypeptide	XP_036008317	RefSeq | MGI Sequence Detail	171	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48