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Gm43948 Gene Detail
Summary
  • Symbol
    Gm43948
  • Name
    predicted gene, 43948
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5690340
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:101036132-101174974 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4180 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5690340
lncRNA gene Chr6:101036132-101174974 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004328
antisense lncRNA gene Chr6:103130743-103275230 (+)
A/J MGP_AJ_G0004306
antisense lncRNA gene Chr6:99164474-99300539 (+)
AKR/J MGP_AKRJ_G0004288
antisense lncRNA gene Chr6:101889095-102025455 (+)
BALB/cJ MGP_BALBcJ_G0004292
antisense lncRNA gene Chr6:99142579-99276476 (+)
C3H/HeJ MGP_C3HHeJ_G0004213
antisense lncRNA gene Chr6:82387305-82527493 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004441
antisense lncRNA gene Chr6:105732725-105878326 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003909
antisense lncRNA gene Chr6:96963069-97089629 (+)
CAST/EiJ MGP_CASTEiJ_G0004202
antisense lncRNA gene Chr6:102171179-102319368 (+)
CBA/J MGP_CBAJ_G0004234
antisense lncRNA gene Chr6:109776515-109925008 (+)
DBA/2J MGP_DBA2J_G0004250
antisense lncRNA gene Chr6:98287281-98425943 (+)
FVB/NJ MGP_FVBNJ_G0004266
antisense lncRNA gene Chr6:97465662-97604703 (+)
LP/J MGP_LPJ_G0004329
antisense lncRNA gene Chr6:103173660-103317804 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004257
antisense lncRNA gene Chr6:113528649-113682332 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004439
antisense lncRNA gene Chr6:101802075-101942438 (+)
PWK/PhJ MGP_PWKPhJ_G0004155
antisense lncRNA gene Chr6:97317480-97452597 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004098
antisense lncRNA gene Chr6:100693584-100825333 (+)
WSB/EiJ MGP_WSBEiJ_G0004239
antisense lncRNA gene Chr6:102317136-102467164 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107427 Ensembl Gene Model | MGI Sequence Detail 138843 C57BL/6J ±  kb
transcript ENSMUST00000203474 Ensembl | MGI Sequence Detail 2376 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory