Gm43940 Gene Detail

Summary

• Symbol
  Gm43940
• Name
  predicted gene, 43940

• Feature Type
  unclassified gene
• IDs
  MGI:5690332
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:139776113-139776277 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690332	unclassified gene	Chr6:139776113-139776277 (+)
129S1/SvImJ	ENSMUSG00200034085	unclassified gene	Chr6:137317890-137318047 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215019887	unclassified gene	Chr17:71630870-71631034 (+)
C57BL/6NJ	ENSMUSG00215036348	unclassified gene	Chr2:169477935-169478099 (-)
C57BL/6NJ	ENSMUSG00215039470	unclassified gene	Chr9:41203080-41203244 (+)
C57BL/6NJ	ENSMUSG00215021050	unclassified gene	Chr2:91944463-91944627 (+)
C57BL/6NJ	ENSMUSG00215028917	unclassified gene	Chr15:34009570-34009734 (+)
C57BL/6NJ	ENSMUSG00215014653	unclassified gene	Chr1:112818142-112818306 (+)
C57BL/6NJ	ENSMUSG00215030669	unclassified gene	Chr6:136417463-136417627 (+)
C57BL/6NJ	ENSMUSG00215039100	unclassified gene	Chr9:36717230-36717394 (+)
C57BL/6NJ	ENSMUSG00215008447	unclassified gene	Chr1:111114303-111114467 (-)
C57BL/6NJ	ENSMUSG00215037997	unclassified gene	Chr9:118109358-118109522 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036541	unclassified gene	Chr6:137090477-137090556 (+)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205031120	unclassified gene	Chr6:135370818-135370960 (+)
JF1/MsJ	ENSUMUG00000011261	unclassified gene	Chr6:135622905-135623126 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225024882	unclassified gene	Chr9:111757356-111757520 (+)
NZO/HlLtJ	ENSMUSG00225053998	unclassified gene	Chr2:92733576-92733740 (-)
NZO/HlLtJ	ENSMUSG00225024227	unclassified gene	Chr9:118680435-118680599 (+)
NZO/HlLtJ	ENSMUSG00225044148	unclassified gene	Chr17:56301617-56301781 (-)
NZO/HlLtJ	ENSMUSG00225024642	unclassified gene	Chr14:84824800-84824964 (-)
NZO/HlLtJ	ENSMUSG00225015164	unclassified gene	Chr8:48207329-48207493 (-)
NZO/HlLtJ	ENSMUSG00225032348	unclassified gene	Chr15:37788443-37788607 (+)
NZO/HlLtJ	ENSMUSG00225003024	unclassified gene	Chr1:118602085-118602249 (-)
PWK/PhJ	ENSLUMG00010036453	unclassified gene	Chr6:134702878-134703037 (+)
SPRET/EiJ	ENSMSPG00010035333	unclassified gene	Chr6:138584063-138584217 (+)
WSB/EiJ	ENSIUOG00005022978	unclassified gene	Chr6:137057338-137057496 (+)

Homology

• Gene Tree
  Gm43940
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27

• Ensembl
  ENSMUSG00000107870 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107870	Ensembl Gene Model | MGI Sequence Detail	165	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;