Gm43900 Gene Detail

Summary

• Symbol
  Gm43900
• Name
  predicted gene, 43900

• Feature Type
  unclassified gene
• IDs
  MGI:5690292
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:80804119-80806787 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  228 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690292	unclassified gene	Chr6:80804119-80806787 (+)
129S1/SvImJ	ENSMUSG00200013042	unclassified gene	Chr6:77762025-77764714 (+)
A/J	ENSMUSG00195012619	unclassified gene	Chr6:77471498-77474161 (+)
AKR/J	ENSMUSG00220002005	unclassified gene	Chr6:76420420-76423097 (+)
BALB/cJ	ENSMUSG00180010537	unclassified gene	Chr6:77847625-77850288 (+)
C3H/HeJ	ENSMUSG00175039247	unclassified gene	Chr6:99582298-99584966 (-)
C57BL/6NJ	ENSMUSG00215015157	unclassified gene	Chr6:77814089-77816757 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001721	unclassified gene	Chr6:77108843-77111494 (+)
CAST/EiJ	ENSTCUG00005008597	unclassified gene	Chr6:77875205-77877879 (+)
CBA/J	ENSMUSG00210011475	unclassified gene	Chr6:77635165-77637835 (+)
DBA/2J	ENSMUSG00185001135	unclassified gene	Chr6:78188042-78190710 (+)
FVB/NJ	ENSMUSG00205028783	unclassified gene	Chr6:76901150-76903813 (+)
JF1/MsJ	ENSUMUG00000021759	unclassified gene	Chr6:77234850-77237552 (+)
LP/J	ENSMUSG00230007798	unclassified gene	Chr6:79317836-79320523 (+)
NOD/ShiLtJ	ENSMUSG00190002275	unclassified gene	Chr6:77288725-77291388 (+)
NZO/HlLtJ	ENSMUSG00225007050	unclassified gene	Chr6:81235620-81238283 (+)
PWK/PhJ	ENSLUMG00010006977	unclassified gene	Chr6:76629354-76632042 (+)
SPRET/EiJ	ENSMSPG00010000420	unclassified gene	Chr6:78685503-78688158 (+)
WSB/EiJ	ENSIUOG00005018543	unclassified gene	Chr6:78197868-78200547 (+)

Homology

• Gene Tree
  Gm43900
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm43900
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108040 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108040	Ensembl Gene Model | MGI Sequence Detail	2669	C57BL/6J

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48