Gm43898 Pseudogene Detail

Summary

• Symbol
  Gm43898
• Name
  predicted gene, 43898

• Feature Type
  pseudogene
• IDs
  MGI:5690290
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:61377591-61378014 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690290	pseudogene	Chr6:61377591-61378014 (+)
129S1/SvImJ	ENSMUSG00200006633	pseudogene	Chr6:58339954-58340377 (+)
A/J	ENSMUSG00195034044	pseudogene	Chr6:58038629-58039052 (+)
AKR/J	ENSMUSG00220006290	pseudogene	Chr6:57509828-57510251 (+)
BALB/cJ	ENSMUSG00180010444	pseudogene	Chr6:58394952-58395375 (+)
C3H/HeJ	ENSMUSG00175040253	pseudogene	Chr6:58080786-58081209 (+)
C57BL/6NJ	ENSMUSG00215029613	pseudogene	Chr6:58374617-58375040 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011906	pseudogene	Chr6:56022556-56022976 (+)
CAST/EiJ	ENSTCUG00005040907	pseudogene	Chr6:58659925-58660348 (+)
CBA/J	ENSMUSG00210034426	pseudogene	Chr6:58193355-58193778 (+)
DBA/2J	ENSMUSG00185020185	pseudogene	Chr6:58775779-58776202 (+)
FVB/NJ	ENSMUSG00205031973	pseudogene	Chr6:58208808-58209231 (+)
JF1/MsJ	ENSUMUG00000038456	pseudogene	Chr6:58067576-58067999 (+)
LP/J	ENSMUSG00230014169	pseudogene	Chr6:59896518-59896941 (+)
NOD/ShiLtJ	ENSMUSG00190009018	pseudogene	Chr6:58042872-58043295 (+)
NZO/HlLtJ	ENSMUSG00225022024	pseudogene	Chr6:61885888-61886311 (+)
PWK/PhJ	ENSLUMG00010018908	pseudogene	Chr6:57320717-57321140 (+)
SPRET/EiJ	ENSMSPG00010009855	pseudogene	Chr6:58973389-58973812 (+)
WSB/EiJ	ENSIUOG00005021039	pseudogene	Chr6:58862821-58863244 (+)

Homology

• Gene Tree
  Gm43898
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000107757 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107757	Ensembl Gene Model | MGI Sequence Detail	424	C57BL/6J
transcript	ENSMUST00000204456	Ensembl | MGI Sequence Detail	424	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;