Gm43894 Gene Detail

Summary

• Symbol
  Gm43894
• Name
  predicted gene, 43894

• Feature Type
  lncRNA gene
• IDs
  MGI:5690286
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:61124204-61124891 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690286	lncRNA gene	Chr6:61124204-61124891 (-)
129S1/SvImJ	ENSMUSG00200006680	lncRNA gene	Chr6:58085977-58086665 (-)
A/J	ENSMUSG00195034178	lncRNA gene	Chr6:57785168-57785855 (-)
AKR/J	ENSMUSG00220006348	lncRNA gene	Chr6:57256439-57257126 (-)
BALB/cJ	ENSMUSG00180010487	lncRNA gene	Chr6:58141503-58142190 (-)
C3H/HeJ	ENSMUSG00175040420	lncRNA gene	Chr6:57827339-57828026 (-)
C57BL/6NJ	ENSMUSG00215029918	lncRNA gene	Chr6:58121189-58121876 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006356	lincRNA gene	Chr6:55782706-55783381 (-)
CAST/EiJ	ENSTCUG00005041005	lncRNA gene	Chr6:58412172-58412972 (-)
CBA/J	ENSMUSG00210034518	lncRNA gene	Chr6:57939934-57940621 (-)
DBA/2J	ENSMUSG00185020237	lncRNA gene	Chr6:58522359-58523046 (-)
FVB/NJ	ENSMUSG00205032259	lncRNA gene	Chr6:57955390-57956077 (-)
JF1/MsJ	ENSUMUG00000038031	lncRNA gene	Chr6:57801583-57802721 (-)
LP/J	ENSMUSG00230014164	lncRNA gene	Chr6:59642553-59643241 (-)
NOD/ShiLtJ	ENSMUSG00190009031	lncRNA gene	Chr6:57789447-57790134 (-)
NZO/HlLtJ	ENSMUSG00225022007	lncRNA gene	Chr6:61631930-61632618 (-)
PWK/PhJ	ENSLUMG00010018918	lncRNA gene	Chr6:57055918-57056604 (-)
SPRET/EiJ	ENSMSPG00010009916	lncRNA gene	Chr6:58718244-58718928 (-)
WSB/EiJ	ENSIUOG00005021103	lncRNA gene	Chr6:58614314-58615001 (-)

Homology

• Gene Tree
  Gm43894
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000107652 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107652	Ensembl Gene Model | MGI Sequence Detail	688	C57BL/6J
transcript	ENSMUST00000203274	Ensembl | MGI Sequence Detail	688	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;