Gm43820 Gene Detail

Summary

• Symbol
  Gm43820
• Name
  predicted gene 43820

• Feature Type
  unclassified gene
• IDs
  MGI:5663957
• Alliance
  genome feature page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr3:37698756-37702101 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  207 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663957	unclassified gene	Chr3:37698756-37702101 (+)
129S1/SvImJ	ENSMUSG00200006959	unclassified gene	Chr3:34444437-34447892 (+)
A/J	ENSMUSG00195001537	unclassified gene	Chr3:34407642-34411121 (+)
AKR/J	ENSMUSG00220000648	unclassified gene	Chr3:34474444-34477857 (+)
BALB/cJ	ENSMUSG00180002720	unclassified gene	Chr3:34553863-34557209 (+)
C3H/HeJ	ENSMUSG00175003517	unclassified gene	Chr3:34440071-34443550 (+)
C57BL/6NJ	ENSMUSG00215001521	unclassified gene	Chr3:34827876-34831221 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000912	unclassified gene	Chr3:32479487-32483230 (+)
CAST/EiJ	ENSTCUG00005001095	unclassified gene	Chr3:34288630-34292025 (+)
CBA/J	ENSMUSG00210001622	unclassified gene	Chr3:34495176-34498655 (+)
DBA/2J	ENSMUSG00185001489	unclassified gene	Chr3:34700367-34703783 (+)
FVB/NJ	ENSMUSG00205000724	unclassified gene	Chr3:33872163-33875508 (+)
JF1/MsJ	ENSUMUG00000001064	unclassified gene	Chr3:34240953-34244298 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190001635	unclassified gene	Chr3:34742173-34745628 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010000818	unclassified gene	Chr3:34285453-34288807 (+)
SPRET/EiJ	ENSMSPG00010000805	unclassified gene	Chr3:34681612-34685192 (+)
WSB/EiJ	ENSIUOG00005013666	unclassified gene	Chr3:34742954-34746433 (+)

Homology

• Gene Tree
  Gm43820
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000106062 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106062	Ensembl Gene Model | MGI Sequence Detail	3346	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm43820:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr28913	Chr3:37697415-37697429 (+)	-1,334 bp
Tssr28914	Chr3:37697873-37697894 (+)	-872 bp
Tssr28915	Chr3:37698176-37698185 (+)	-575 bp
Tssr28916	Chr3:37698281-37698293 (+)	-469 bp
Tssr28917	Chr3:37698968-37698972 (+)	214 bp