Gm43703 Gene Detail

Summary

• Symbol
  Gm43703
• Name
  predicted gene 43703

• Feature Type
  lncRNA gene
• IDs
  MGI:5663840
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:140591544-140592306 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663840	lncRNA gene	Chr5:140591544-140592306 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006845	lincRNA gene	Chr5:145710660-145711422 (-)
A/J	MGP_AJ_G0006839	lincRNA gene	Chr5:139486978-139487740 (-)
AKR/J	MGP_AKRJ_G0006809	lincRNA gene	Chr5:143845925-143846683 (-)
BALB/cJ	MGP_BALBcJ_G0006815	lincRNA gene	Chr5:140735503-140736265 (-)
C3H/HeJ	MGP_C3HHeJ_G0006760	lincRNA gene	Chr5:144645862-144646624 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0006979	lincRNA gene	Chr5:151102061-151102823 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006231	lincRNA gene	Chr5:133322408-133323387 (-)
CAST/EiJ	MGP_CASTEiJ_G0006679	lincRNA gene	Chr5:144067274-144068036 (-)
CBA/J	MGP_CBAJ_G0006742	lincRNA gene	Chr5:157294854-157295616 (-)
DBA/2J	MGP_DBA2J_G0006762	lincRNA gene	Chr5:139301399-139302161 (-)
FVB/NJ	MGP_FVBNJ_G0006785	lincRNA gene	Chr5:138456214-138456976 (-)
LP/J	MGP_LPJ_G0006845	lincRNA gene	Chr5:146319027-146319789 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006767	lincRNA gene	Chr5:159893866-159894628 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006982	lincRNA gene	Chr5:143687105-143687867 (-)
PWK/PhJ	MGP_PWKPhJ_G0006621	lincRNA gene	Chr5:138322857-138323619 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006528	lincRNA gene	Chr5:141394017-141394779 (-)
WSB/EiJ	MGP_WSBEiJ_G0006733	lincRNA gene	Chr5:144471259-144472021 (-)

Homology

• Gene Tree
  Gm43703
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105699 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105699	Ensembl Gene Model | MGI Sequence Detail	763	C57BL/6J
transcript	ENSMUST00000200523	Ensembl | MGI Sequence Detail	763	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;