Gm43585 Gene Detail

Summary

• Symbol
  Gm43585
• Name
  predicted gene 43585

• Feature Type
  lncRNA gene
• IDs
  MGI:5663722
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:104553557-104554959 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663722	lncRNA gene	Chr3:104553557-104554959 (+)
129S1/SvImJ	ENSMUSG00200044942	lncRNA gene	Chr3:101160181-101161598 (+)
A/J	ENSMUSG00195025551	lncRNA gene	Chr3:101581062-101582462 (+)
AKR/J	ENSMUSG00220044134	lncRNA gene	Chr3:99939294-99940711 (+)
BALB/cJ	ENSMUSG00180019996	lncRNA gene	Chr3:101512120-101513524 (+)
C3H/HeJ	ENSMUSG00175031598	lncRNA gene	Chr3:101061453-101062851 (+)
C57BL/6NJ	ENSMUSG00215032762	lncRNA gene	Chr3:101824395-101825797 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034535	sense intronic lncRNA gene	Chr3:98700198-98701555 (+)
CAST/EiJ	ENSTCUG00005021910	lncRNA gene	Chr3:101783259-101784649 (+)
CBA/J	ENSMUSG00210008846	lncRNA gene	Chr3:101683500-101684898 (+)
DBA/2J	ENSMUSG00185022070	lncRNA gene	Chr3:102160503-102161905 (+)
FVB/NJ	ENSMUSG00205030168	lncRNA gene	Chr3:100744733-100746146 (+)
JF1/MsJ	ENSUMUG00000052169	lncRNA gene	Chr3:100901170-100902610 (+)
LP/J	ENSMUSG00230020598	lncRNA gene	Chr3:104088124-104089541 (+)
NOD/ShiLtJ	ENSMUSG00190040527	lncRNA gene	Chr3:102364116-102365518 (+)
NZO/HlLtJ	ENSMUSG00225020174	lncRNA gene	Chr3:106556695-106558096 (+)
PWK/PhJ	ENSLUMG00010031146	lncRNA gene	Chr3:100985781-100987207 (+)
SPRET/EiJ	ENSMSPG00010037087	lncRNA gene	Chr3:101168499-101169926 (+)
WSB/EiJ	ENSIUOG00005004618	lncRNA gene	Chr3:101707389-101708798 (+)

Homology

• Gene Tree
  Gm43585
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000106287 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106287	Ensembl Gene Model | MGI Sequence Detail	1403	C57BL/6J
transcript	ENSMUST00000199375	Ensembl | MGI Sequence Detail	1403	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm43585:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31046	Chr3:104552348-104552352 (+)	-1,207 bp