Gm43569 Gene Detail

Summary

• Symbol
  Gm43569
• Name
  predicted gene 43569

• Feature Type
  lncRNA gene
• IDs
  MGI:5663706
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:122339967-122368389 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  725 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663706	lncRNA gene	Chr3:122339967-122368389 (+)
129S1/SvImJ	ENSMUSG00200026966	lncRNA gene	Chr3:119057655-119067337 (+)
A/J	ENSMUSG00195016002	lncRNA gene	Chr3:119264983-119274663 (+)
AKR/J	ENSMUSG00220025782	lncRNA gene	Chr3:117649807-117659497 (+)
BALB/cJ	ENSMUSG00180030121	lncRNA gene	Chr3:119201528-119211211 (+)
C3H/HeJ	ENSMUSG00175027629	lncRNA gene	Chr3:118748306-118757986 (+)
C57BL/6NJ	ENSMUSG00215008691	lncRNA gene	Chr3:119495754-119505444 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003439	antisense lncRNA gene	Chr3:116086020-116095629 (+)
CAST/EiJ	ENSTCUG00005034366	lncRNA gene	Chr3:119770947-119780683 (+)
CBA/J	ENSMUSG00210002933	lncRNA gene	Chr3:119379241-119388923 (+)
DBA/2J	ENSMUSG00185007741	lncRNA gene	Chr3:119943683-119953363 (+)
FVB/NJ	ENSMUSG00205008118	lncRNA gene	Chr3:118313835-118323525 (+)
JF1/MsJ	ENSUMUG00000003384	lncRNA gene	Chr3:118749339-118759019 (+)
LP/J	ENSMUSG00230011693	lncRNA gene	Chr3:121909392-121919074 (+)
NOD/ShiLtJ	ENSMUSG00190034120	lncRNA gene	Chr3:120324879-120334569 (+)
NZO/HlLtJ	ENSMUSG00225003648	lncRNA gene	Chr3:124383784-124393474 (+)
PWK/PhJ	ENSLUMG00010009867	lncRNA gene	Chr3:118740203-118749913 (+)
SPRET/EiJ	ENSMSPG00010031640	lncRNA gene	Chr3:119476689-119486360 (+)
WSB/EiJ	ENSIUOG00005007018	lncRNA gene	Chr3:119547857-119557574 (+)

Homology

• Gene Tree
  Gm43569
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000106194 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106194	Ensembl Gene Model | MGI Sequence Detail	28423	C57BL/6J
transcript	ENSMUST00000280452	Ensembl | MGI Sequence Detail	586	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm43569:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31506	Chr3:122360368-122360388 (+)	20,411 bp