Gm43470 Gene Detail

Summary

• Symbol
  Gm43470
• Name
  predicted gene 43470

• Feature Type
  lncRNA gene
• IDs
  MGI:5663607
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:150294330-150363596 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  2435 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663607	lncRNA gene	Chr3:150294330-150363596 (+)
129S1/SvImJ	ENSMUSG00200003989	lncRNA gene	Chr3:147231685-147255187 (+)
A/J	ENSMUSG00195003501	lncRNA gene	Chr3:147364968-147388467 (+)
AKR/J	ENSMUSG00220000487	lncRNA gene	Chr3:145761190-145784592 (+)
BALB/cJ	ENSMUSG00180027748	lncRNA gene	Chr3:147222761-147246250 (+)
C3H/HeJ	ENSMUSG00175020262	lncRNA gene	Chr3:146814948-146838445 (+)
C57BL/6NJ	ENSMUSG00215018543	lncRNA gene	Chr3:147486773-147510206 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005791	lincRNA gene	Chr3:143654725-143676870 (+)
CAST/EiJ	ENSTCUG00005001379	lncRNA gene	Chr3:147905668-147929006 (+)
CBA/J	ENSMUSG00210004777	lncRNA gene	Chr3:147462266-147485760 (+)
DBA/2J	ENSMUSG00185025323	lncRNA gene	Chr3:148092196-148115596 (+)
FVB/NJ	ENSMUSG00205009485	lncRNA gene	Chr3:146356755-146380163 (+)
JF1/MsJ	ENSUMUG00000034331	lncRNA gene	Chr3:146878238-146901529 (+)
LP/J	ENSMUSG00230020592	lncRNA gene	Chr3:149984381-150007875 (+)
NOD/ShiLtJ	ENSMUSG00190004876	lncRNA gene	Chr3:148443151-148466556 (+)
NZO/HlLtJ	ENSMUSG00225003496	lncRNA gene	Chr3:152499792-152523286 (+)
PWK/PhJ	ENSLUMG00010001877	lncRNA gene	Chr3:146784105-146807514 (+)
SPRET/EiJ	ENSMSPG00010008367	lncRNA gene	Chr3:148103993-148125070 (+)
WSB/EiJ	ENSIUOG00005015955	lncRNA gene	Chr3:147597587-147620985 (+)

Homology

• Gene Tree
  Gm43470
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  33

• Ensembl
  ENSMUSG00000105190 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105190	Ensembl Gene Model | MGI Sequence Detail	69267	C57BL/6J
transcript	ENSMUST00000268060	Ensembl | MGI Sequence Detail	1394	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm43470:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32379	Chr3:150294448-150294459 (+)	124 bp