Gm43464 Gene Detail

Summary

• Symbol
  Gm43464
• Name
  predicted gene 43464

• Feature Type
  lncRNA gene
• IDs
  MGI:5663601
  NCBI Gene: 115489697
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:100599557-100607400 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663601	lncRNA gene	Chr3:100599557-100608298 (+)
129S1/SvImJ	ENSMUSG00200045914	lncRNA gene	Chr3:97204429-97211806 (+)
A/J	ENSMUSG00195048751	lncRNA gene	Chr3:97604832-97617474 (+)
AKR/J	ENSMUSG00220042743	lncRNA gene	Chr3:95964983-95977629 (+)
BALB/cJ	ENSMUSG00180044701	lncRNA gene	Chr3:97544462-97557104 (+)
C3H/HeJ	ENSMUSG00175030860	lncRNA gene	Chr3:97090728-97103370 (+)
C57BL/6NJ	ENSMUSG00215039872	lncRNA gene	Chr3:97861857-97869236 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005688	lincRNA gene	Chr3:94813598-94820913 (+)
CAST/EiJ	ENSTCUG00005020334	lncRNA gene	Chr3:97806110-97813458 (+)
CBA/J	ENSMUSG00210051813	lncRNA gene	Chr3:97712954-97725595 (+)
DBA/2J	ENSMUSG00185045239	lncRNA gene	Chr3:98197633-98210289 (+)
FVB/NJ	ENSMUSG00205027513	lncRNA gene	Chr3:96781389-96788764 (+)
JF1/MsJ	ENSUMUG00000050453	lncRNA gene	Chr3:96908283-96915703 (+)
LP/J	ENSMUSG00230046717	lncRNA gene	Chr3:100133121-100140499 (+)
NOD/ShiLtJ	ENSMUSG00190049851	lncRNA gene	Chr3:98385100-98397757 (+)
NZO/HlLtJ	ENSMUSG00225021245	lncRNA gene	Chr3:102577936-102590581 (+)
PWK/PhJ	ENSLUMG00010033185	lncRNA gene	Chr3:97004861-97012162 (+)
SPRET/EiJ	ENSMSPG00010047878	lncRNA gene	Chr3:97252542-97259852 (+)
WSB/EiJ	ENSIUOG00005031358	lncRNA gene	Chr3:97725691-97738336 (+)

Homology

• Gene Tree
  Gm43464
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm43464
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000106227 (Evidence)
• NCBI Gene
  115489697

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106227	Ensembl Gene Model | MGI Sequence Detail	7844	C57BL/6J
transcript	ENSMUST00000375174	Ensembl | MGI Sequence Detail	1133	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm43464:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr30881	Chr3:100599757-100599786 (+)	215 bp