Gm43189 Gene Detail

Summary

• Symbol
  Gm43189
• Name
  predicted gene 43189

• Feature Type
  lncRNA gene
• IDs
  MGI:5663326
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:98194304-98197372 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  260 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663326	lncRNA gene	Chr3:98194304-98197372 (+)
129S1/SvImJ	ENSMUSG00200046572	lncRNA gene	Chr3:94825896-94828962 (+)
A/J	ENSMUSG00195050121	lncRNA gene	Chr3:95224738-95227806 (+)
AKR/J	ENSMUSG00220044557	lncRNA gene	Chr3:93576839-93579907 (+)
BALB/cJ	ENSMUSG00180045297	lncRNA gene	Chr3:95171410-95174468 (+)
C3H/HeJ	ENSMUSG00175034776	lncRNA gene	Chr3:94783027-94786095 (+)
C57BL/6NJ	ENSMUSG00215039399	lncRNA gene	Chr3:95553033-95556103 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021942	lncRNA gene	Chr3:95487537-95490592 (+)
CBA/J	ENSMUSG00210051837	lncRNA gene	Chr3:95335997-95339065 (+)
DBA/2J	ENSMUSG00185047561	lncRNA gene	Chr3:95793399-95796457 (+)
FVB/NJ	ENSMUSG00205030679	lncRNA gene	Chr3:94452148-94455214 (+)
JF1/MsJ	ENSUMUG00000052977	lncRNA gene	Chr3:94700974-94704034 (+)
LP/J	ENSMUSG00230046937	lncRNA gene	Chr3:97754428-97757494 (+)
NOD/ShiLtJ	ENSMUSG00190050773	lncRNA gene	Chr3:95968651-95971709 (+)
NZO/HlLtJ	ENSMUSG00225012999	lncRNA gene	Chr3:100226987-100230045 (+)
PWK/PhJ	ENSLUMG00010033451	lncRNA gene	Chr3:94698287-94701345 (+)
SPRET/EiJ	ENSMSPG00010047779	lncRNA gene	Chr3:94977440-94980493 (+)
WSB/EiJ	ENSIUOG00005033930	lncRNA gene	Chr3:95362035-95365099 (+)

Homology

• Gene Tree
  Gm43189
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105909 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105909	Ensembl Gene Model | MGI Sequence Detail	3069	C57BL/6J
transcript	ENSMUST00000196040	Ensembl | MGI Sequence Detail	3069	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm43189:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr30833	Chr3:98194323-98194324 (+)	20 bp