Gm43069 Gene Detail

Summary

• Symbol
  Gm43069
• Name
  predicted gene 43069

• Feature Type
  lncRNA gene
• IDs
  MGI:5663206
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:120915861-120943688 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  759 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663206	lncRNA gene	Chr5:120915861-120943688 (+)
129S1/SvImJ	ENSMUSG00200029835	lncRNA gene	Chr5:114655116-114682935 (+)
A/J	ENSMUSG00195012426	lncRNA gene	Chr5:114176300-114204121 (+)
AKR/J	ENSMUSG00220048207	lncRNA gene	Chr5:113677254-113705070 (+)
BALB/cJ	ENSMUSG00180039209	lncRNA gene	Chr5:114290898-114318717 (+)
C3H/HeJ	ENSMUSG00175033552	lncRNA gene	Chr5:116288913-116316776 (+)
C57BL/6NJ	ENSMUSG00215043667	lncRNA gene	Chr5:114322793-114350623 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003756	antisense lncRNA gene	Chr5:113732341-113760199 (+)
CAST/EiJ	ENSTCUG00005042388	lncRNA gene	Chr5:113494855-113522820 (+)
CBA/J	ENSMUSG00210010831	lncRNA gene	Chr5:115039781-115067652 (+)
DBA/2J	ENSMUSG00185054621	lncRNA gene	Chr5:118099135-118126959 (+)
FVB/NJ	ENSMUSG00205045384	lncRNA gene	Chr5:113952941-113980777 (+)
JF1/MsJ	ENSUMUG00000055456	lncRNA gene	Chr5:120938023-120963091 (+)
LP/J	ENSMUSG00230047759	lncRNA gene	Chr5:122177314-122205132 (+)
NOD/ShiLtJ	ENSMUSG00190047757	lncRNA gene	Chr5:113987026-114014846 (+)
NZO/HlLtJ	ENSMUSG00225018833	lncRNA gene	Chr5:129854443-129882239 (+)
PWK/PhJ	ENSLUMG00010044159	lncRNA gene	Chr5:112837866-112865868 (+)
SPRET/EiJ	ENSMSPG00010046598	lncRNA gene	Chr5:116153360-116187765 (+)
WSB/EiJ	ENSIUOG00005020403	lncRNA gene	Chr5:116675776-116703533 (+)

Homology

• Gene Tree
  Gm43069
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm43069
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000107179 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107179	Ensembl Gene Model | MGI Sequence Detail	27828	C57BL/6J
transcript	ENSMUST00000201006	Ensembl | MGI Sequence Detail	859	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;