Gm43065 Gene Detail

Summary

• Symbol
  Gm43065
• Name
  predicted gene 43065

• Feature Type
  lncRNA gene
• IDs
  MGI:5663202
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:103772022-103774113 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  41 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663202	lncRNA gene	Chr3:103772022-103774113 (+)
129S1/SvImJ	ENSMUSG00200045322	lncRNA gene	Chr3:100380054-100382144 (+)
A/J	ENSMUSG00195050279	lncRNA gene	Chr3:100793605-100795695 (+)
AKR/J	ENSMUSG00220043561	lncRNA gene	Chr3:99153579-99155669 (+)
BALB/cJ	ENSMUSG00180041196	lncRNA gene	Chr3:100721469-100723558 (+)
C3H/HeJ	ENSMUSG00175033825	lncRNA gene	Chr3:100275939-100278029 (+)
C57BL/6NJ	ENSMUSG00215034641	lncRNA gene	Chr3:101041936-101044027 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034522	sense intronic lncRNA gene	Chr3:97936515-97938598 (+)
CAST/EiJ	ENSTCUG00005020747	lncRNA gene	Chr3:101000621-101002713 (+)
CBA/J	ENSMUSG00210051402	lncRNA gene	Chr3:100897985-100900075 (+)
DBA/2J	ENSMUSG00185022176	lncRNA gene	Chr3:101378104-101380195 (+)
FVB/NJ	ENSMUSG00205033982	lncRNA gene	Chr3:99958637-99960727 (+)
JF1/MsJ	ENSUMUG00000051418	lncRNA gene	Chr3:100125842-100127934 (+)
LP/J	ENSMUSG00230020621	lncRNA gene	Chr3:103308380-103310470 (+)
NOD/ShiLtJ	ENSMUSG00190047967	lncRNA gene	Chr3:101573490-101575579 (+)
NZO/HlLtJ	ENSMUSG00225020197	lncRNA gene	Chr3:105775215-105777304 (+)
PWK/PhJ	ENSLUMG00010030054	lncRNA gene	Chr3:100184774-100186865 (+)
SPRET/EiJ	ENSMSPG00010046423	lncRNA gene	Chr3:100408293-100410375 (+)
WSB/EiJ	ENSIUOG00005031483	lncRNA gene	Chr3:100912993-100915084 (+)

Homology

• Gene Tree
  Gm43065
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000105986 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105986	Ensembl Gene Model | MGI Sequence Detail	2092	C57BL/6J
transcript	ENSMUST00000198971	Ensembl | MGI Sequence Detail	2092	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm43065:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31027	Chr3:103771389-103771392 (+)	-631 bp