Gm43009 Gene Detail

Summary

• Symbol
  Gm43009
• Name
  predicted gene 43009

• Feature Type
  unclassified gene
• IDs
  MGI:5663146
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:126438110-126441675 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663146	unclassified gene	Chr3:126438110-126441675 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001264	unclassified gene	Chr3:129069579-129073540 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0001231	unclassified gene	Chr3:127894043-127900328 (+)
BALB/cJ	MGP_BALBcJ_G0001240	unclassified gene	Chr3:124529695-124535334 (+)
C3H/HeJ	MGP_C3HHeJ_G0001218	unclassified gene	Chr3:128271060-128274596 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001355	unclassified gene	Chr3:133748719-133752395 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001060	unclassified gene	Chr3:119931929-119935653 (+)
CAST/EiJ	MGP_CASTEiJ_G0001200	unclassified gene	Chr3:127778681-127782244 (+)
CBA/J	MGP_CBAJ_G0001209	unclassified gene	Chr3:138216666-138220202 (+)
DBA/2J	MGP_DBA2J_G0001213	unclassified gene	Chr3:123901050-123904646 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0001271	unclassified gene	Chr3:130613805-130627371 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001210	unclassified gene	Chr3:146219096-146222660 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0001156	unclassified gene	Chr3:123607966-123611502 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001133	unclassified gene	Chr3:125602026-125607588 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm43009
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000105586 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105586	Ensembl Gene Model | MGI Sequence Detail	3566	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;