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Gm42920 Gene Detail
Summary
  • Symbol
    Gm42920
  • Name
    predicted gene 42920
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5663057
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:38423547-38427785 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    108 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663057
 lncRNA gene Chr3:38423547-38427785 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006167
 lincRNA gene Chr3:36248778-36253040 (+)
A/J MGP_AJ_G0006159
 lincRNA gene Chr3:35497674-35501918 (+)
AKR/J MGP_AKRJ_G0006135
 lincRNA gene Chr3:36178813-36183560 (+)
BALB/cJ MGP_BALBcJ_G0006135
 lincRNA gene Chr3:35262602-35266840 (+)
C3H/HeJ MGP_C3HHeJ_G0006085
 lincRNA gene Chr3:36235100-36239344 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006297
 lincRNA gene Chr3:37904942-37909180 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005608
 lincRNA gene Chr3:33181881-33186205 (+)
CAST/EiJ MGP_CASTEiJ_G0006020
 lincRNA gene Chr3:36135516-36139691 (+)
CBA/J MGP_CBAJ_G0006070
 lincRNA gene Chr3:38937836-38942080 (+)
DBA/2J MGP_DBA2J_G0006089
 lincRNA gene Chr3:34974357-34978594 (+)
FVB/NJ MGP_FVBNJ_G0006113
 lincRNA gene Chr3:34388124-34392362 (+)
LP/J MGP_LPJ_G0006171
 lincRNA gene Chr3:37061724-37066045 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006103
 lincRNA gene Chr3:41420535-41424779 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006301
 lincRNA gene Chr3:36035880-36040142 (+)
PWK/PhJ MGP_PWKPhJ_G0005965
 lincRNA gene Chr3:34656239-34660482 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005874
 lincRNA gene Chr3:35393345-35396919 (+)
WSB/EiJ MGP_WSBEiJ_G0006067
 lincRNA gene Chr3:36048490-36052752 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106008 Ensembl Gene Model | MGI Sequence Detail 4239 C57BL/6J ±  kb
transcript ENSMUST00000196616 Ensembl | MGI Sequence Detail 409 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 5
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:157707 Puligilla C, et al., Sox2 induces neuronal formation in the developing mammalian cochlea. J Neurosci. 2010 Jan 13;30(2):714-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory