Gm42872 Gene Detail

Summary

• Symbol
  Gm42872
• Name
  predicted gene 42872

• Feature Type
  unclassified gene
• IDs
  MGI:5663009
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:132473168-132475134 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663009	unclassified gene	Chr3:132473168-132475134 (+)
129S1/SvImJ	ENSMUSG00200004474	unclassified gene	Chr3:129255461-129257429 (+)
A/J	ENSMUSG00195008486	unclassified gene	Chr3:129354568-129356534 (+)
AKR/J	ENSMUSG00220023273	unclassified gene	Chr3:127793896-127795862 (+)
BALB/cJ	ENSMUSG00180003953	unclassified gene	Chr3:129283462-129285428 (+)
C3H/HeJ	ENSMUSG00175013864	unclassified gene	Chr3:128857215-128859181 (+)
C57BL/6NJ	ENSMUSG00215024222	unclassified gene	Chr3:129628796-129630762 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001091	unclassified gene	Chr3:126206811-126208763 (+)
CAST/EiJ	ENSTCUG00005003733	unclassified gene	Chr3:129953343-129955314 (+)
CBA/J	ENSMUSG00210004452	unclassified gene	Chr3:129474962-129476928 (+)
DBA/2J	ENSMUSG00185026395	unclassified gene	Chr3:130099402-130101370 (+)
FVB/NJ	ENSMUSG00205027229	unclassified gene	Chr3:128411091-128413057 (+)
JF1/MsJ	ENSUMUG00000033420	unclassified gene	Chr3:128825935-128827860 (+)
LP/J	ENSMUSG00230004554	unclassified gene	Chr3:132073945-132075913 (+)
NOD/ShiLtJ	ENSMUSG00190002000	unclassified gene	Chr3:130471587-130473553 (+)
NZO/HlLtJ	ENSMUSG00225006046	unclassified gene	Chr3:134510325-134512255 (+)
PWK/PhJ	ENSLUMG00010015721	unclassified gene	Chr3:128821315-128823240 (+)
SPRET/EiJ	ENSMSPG00010013088	unclassified gene	Chr3:129858976-129860950 (+)
WSB/EiJ	ENSIUOG00005017083	unclassified gene	Chr3:129625695-129627663 (+)

Homology

• Gene Tree
  Gm42872
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105719 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105719	Ensembl Gene Model | MGI Sequence Detail	1967	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm42872:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31761	Chr3:132472332-132472335 (+)	-834 bp