Gm42756 Gene Detail

Summary

• Symbol
  Gm42756
• Name
  predicted gene 42756

• Feature Type
  lncRNA gene
• IDs
  MGI:5662893
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:109366143-109383509 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  425 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662893	lncRNA gene	Chr9:109366143-109383509 (+)
129S1/SvImJ	ENSMUSG00200045397	lncRNA gene	Chr9:106459216-106476549 (+)
A/J	ENSMUSG00195045281	lncRNA gene	Chr9:105744563-105761928 (+)
AKR/J	ENSMUSG00220031667	lncRNA gene	Chr9:106080306-106097678 (+)
BALB/cJ	ENSMUSG00180037764	lncRNA gene	Chr9:106199507-106216869 (+)
C3H/HeJ	ENSMUSG00175046664	lncRNA gene	Chr9:106415398-106432767 (+)
C57BL/6NJ	ENSMUSG00215042218	lncRNA gene	Chr9:106302838-106320185 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035571	lncRNA gene	Chr9:106125099-106140920 (+)
CBA/J	ENSMUSG00210046574	lncRNA gene	Chr9:106140755-106158163 (+)
DBA/2J	ENSMUSG00185044435	lncRNA gene	Chr9:106463384-106480753 (+)
FVB/NJ	ENSMUSG00205050444	lncRNA gene	Chr9:106402447-106419784 (+)
JF1/MsJ	ENSUMUG00000056006	lncRNA gene	Chr9:106242842-106260254 (+)
LP/J	ENSMUSG00230050340	lncRNA gene	Chr9:106591430-106608756 (+)
NOD/ShiLtJ	ENSMUSG00190050981	lncRNA gene	Chr9:106051059-106068424 (+)
NZO/HlLtJ	ENSMUSG00225024487	lncRNA gene	Chr9:106829500-106846844 (+)
PWK/PhJ	ENSLUMG00010044290	lncRNA gene	Chr9:106258318-106275679 (+)
SPRET/EiJ	ENSMSPG00010047851	lncRNA gene	Chr9:108017777-108034078 (+)
WSB/EiJ	ENSIUOG00005047296	lncRNA gene	Chr9:105505199-105522543 (+)

Homology

• Gene Tree
  Gm42756
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000104674 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104674	Ensembl Gene Model | MGI Sequence Detail	17367	C57BL/6J
transcript	ENSMUST00000196601	Ensembl | MGI Sequence Detail	2614	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm42756:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr87236	Chr9:109366114-109366149 (+)	-11 bp