Gm42482 Gene Detail

Summary

• Symbol
  Gm42482
• Name
  predicted gene 42482
• Synonyms
  RP23-458G12.2

• Feature Type
  unclassified gene
• IDs
  MGI:5662619
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:57955845-57957791 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  175 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662619	unclassified gene	Chr5:57955845-57957791 (+)
129S1/SvImJ	ENSMUSG00200000137	unclassified gene	Chr5:53511883-53513829 (+)
A/J	ENSMUSG00195000511	unclassified gene	Chr5:52898964-52900910 (+)
AKR/J	ENSMUSG00220007234	unclassified gene	Chr5:52964571-52966517 (+)
BALB/cJ	ENSMUSG00180006708	unclassified gene	Chr5:52672120-52674066 (+)
C3H/HeJ	ENSMUSG00175001787	unclassified gene	Chr5:54700218-54702164 (+)
C57BL/6NJ	ENSMUSG00215002871	unclassified gene	Chr5:53458357-53460303 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001329	unclassified gene	Chr5:51784380-51786269 (+)
CAST/EiJ	ENSTCUG00005000717	unclassified gene	Chr5:52792351-52794298 (+)
CBA/J	ENSMUSG00210000286	unclassified gene	Chr5:53658816-53660762 (+)
DBA/2J	ENSMUSG00185000213	unclassified gene	Chr5:55521208-55523154 (+)
FVB/NJ	ENSMUSG00205011803	unclassified gene	Chr5:52508515-52510461 (+)
JF1/MsJ	ENSUMUG00000001046	unclassified gene	Chr5:60093993-60095938 (+)
LP/J	ENSMUSG00230010517	unclassified gene	Chr5:60183851-60185797 (+)
NOD/ShiLtJ	ENSMUSG00190000663	unclassified gene	Chr5:52589990-52591936 (+)
NZO/HlLtJ	ENSMUSG00225002735	unclassified gene	Chr5:65308185-65310131 (+)
PWK/PhJ	ENSLUMG00010004472	unclassified gene	Chr5:52702328-52704273 (+)
SPRET/EiJ	ENSMSPG00010004161	unclassified gene	Chr5:54342671-54344599 (+)
WSB/EiJ	ENSIUOG00005000151	unclassified gene	Chr5:55536084-55538029 (+)

Homology

• Gene Tree
  Gm42482
  

Expression

• Assay Results
  597
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105050 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105050	Ensembl Gene Model | MGI Sequence Detail	1947	C57BL/6J

References

• Summaries
  All 4

  Developmental Gene Expression 1
• Earliest
  J:283645 Peng G, et al., Molecular architecture of lineage allocation and tissue organization in early mouse embryo. Nature. 2019 Aug;572(7770):528-532

TSS for Gm42482:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr46308	Chr5:57957715-57957728 (+)	1,877 bp