Gm42478 Gene Detail

Summary

• Symbol
  Gm42478
• Name
  predicted gene 42478

• Feature Type
  unclassified gene
• IDs
  MGI:5662615
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:58087092-58088558 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662615	unclassified gene	Chr5:58087092-58088558 (+)
129S1/SvImJ	ENSMUSG00200000115	unclassified gene	Chr5:53643136-53644602 (+)
A/J	ENSMUSG00195000301	unclassified gene	Chr5:53030242-53031708 (+)
AKR/J	ENSMUSG00220007274	unclassified gene	Chr5:53095842-53097308 (+)
BALB/cJ	ENSMUSG00180006337	unclassified gene	Chr5:52803376-52804842 (+)
C3H/HeJ	ENSMUSG00175001749	unclassified gene	Chr5:54831500-54832966 (+)
C57BL/6NJ	ENSMUSG00215002865	unclassified gene	Chr5:53589623-53591089 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001332	unclassified gene	Chr5:51914945-51916511 (+)
CAST/EiJ	ENSTCUG00005000436	unclassified gene	Chr5:52919328-52920794 (+)
CBA/J	ENSMUSG00210000305	unclassified gene	Chr5:53790081-53791547 (+)
DBA/2J	ENSMUSG00185000080	unclassified gene	Chr5:55652450-55653916 (+)
FVB/NJ	ENSMUSG00205010861	unclassified gene	Chr5:52639808-52641274 (+)
JF1/MsJ	ENSUMUG00000000897	unclassified gene	Chr5:60221813-60223278 (+)
LP/J	ENSMUSG00230010527	unclassified gene	Chr5:60315095-60316561 (+)
NOD/ShiLtJ	ENSMUSG00190000384	unclassified gene	Chr5:52721266-52722732 (+)
NZO/HlLtJ	ENSMUSG00225002740	unclassified gene	Chr5:65439466-65440932 (+)
PWK/PhJ	ENSLUMG00010004362	unclassified gene	Chr5:52836982-52838447 (+)
SPRET/EiJ	ENSMSPG00010004092	unclassified gene	Chr5:54477594-54479062 (+)
WSB/EiJ	ENSIUOG00005000091	unclassified gene	Chr5:55663887-55665353 (+)

Homology

• Gene Tree
  Gm42478
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000106337 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106337	Ensembl Gene Model | MGI Sequence Detail	1467	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm42478:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr46326	Chr5:58085654-58085699 (+)	-1,415 bp