Gm42449 Gene Detail

Summary

• Symbol
  Gm42449
• Name
  predicted gene 42449

• Feature Type
  unclassified gene
• IDs
  MGI:5662586
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:130930434-130932691 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662586	unclassified gene	Chr3:130930434-130932691 (+)
129S1/SvImJ	ENSMUSG00200003918	unclassified gene	Chr3:127704114-127706366 (+)
A/J	ENSMUSG00195008337	unclassified gene	Chr3:127818357-127820614 (+)
AKR/J	ENSMUSG00220022844	unclassified gene	Chr3:126260372-126262625 (+)
BALB/cJ	ENSMUSG00180003906	unclassified gene	Chr3:127747295-127749552 (+)
C3H/HeJ	ENSMUSG00175014669	unclassified gene	Chr3:127319190-127321444 (+)
C57BL/6NJ	ENSMUSG00215022925	unclassified gene	Chr3:128080037-128082294 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001089	unclassified gene	Chr3:124725956-124728203 (+)
CAST/EiJ	ENSTCUG00005003851	unclassified gene	Chr3:128404073-128406310 (+)
CBA/J	ENSMUSG00210004542	unclassified gene	Chr3:127921847-127924104 (+)
DBA/2J	ENSMUSG00185026264	unclassified gene	Chr3:128540887-128543141 (+)
FVB/NJ	ENSMUSG00205030289	unclassified gene	Chr3:126874044-126876296 (+)
JF1/MsJ	ENSUMUG00000031840	unclassified gene	Chr3:127294105-127296338 (+)
LP/J	ENSMUSG00230004499	unclassified gene	Chr3:130524341-130526593 (+)
NOD/ShiLtJ	ENSMUSG00190001590	unclassified gene	Chr3:128938135-128940389 (+)
NZO/HlLtJ	ENSMUSG00225005935	unclassified gene	Chr3:132969772-132972030 (+)
PWK/PhJ	ENSLUMG00010015459	unclassified gene	Chr3:127288314-127290575 (+)
SPRET/EiJ	ENSMSPG00010012846	unclassified gene	Chr3:128248674-128250891 (+)
WSB/EiJ	ENSIUOG00005017206	unclassified gene	Chr3:128075447-128077707 (+)

Homology

• Gene Tree
  Gm42449
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000104612 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104612	Ensembl Gene Model | MGI Sequence Detail	2258	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm42449:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31709	Chr3:130929795-130929799 (+)	-637 bp