Mark1-ps2 Pseudogene Detail

Summary

• Symbol
  Mark1-ps2
• Name
  MAP/microtubule affinity-regulating kinase 1, pseudogene 2
• Synonyms
  Gm7225

• Feature Type
  pseudogene
• IDs
  MGI:5645794
  NCBI Gene: 102637912
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:54081787-54082170 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 27.97 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5645794	pseudogene	Chr17:54076863-54083714 (+)
129S1/SvImJ	ENSMUSG00200028809	pseudogene	Chr17:49303401-49303784 (+)
A/J	ENSMUSG00195007232	pseudogene	Chr17:50755712-50756095 (+)
AKR/J	ENSMUSG00220038141	pseudogene	Chr17:49763346-49763729 (+)
BALB/cJ	ENSMUSG00180006650	pseudogene	Chr17:50511880-50512263 (+)
C3H/HeJ	ENSMUSG00175016825	pseudogene	Chr17:49819041-49819424 (+)
C57BL/6NJ	ENSMUSG00215036502	pseudogene	Chr17:49412738-49413121 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019590	pseudogene	Chr17:50620823-50621206 (+)
CBA/J	ENSMUSG00210039694	pseudogene	Chr17:49568554-49568937 (+)
DBA/2J	ENSMUSG00185009585	pseudogene	Chr17:52469123-52469506 (+)
FVB/NJ	ENSMUSG00205053117	pseudogene	Chr17:50035894-50036277 (+)
JF1/MsJ	ENSUMUG00000034379	pseudogene	Chr17:52227118-52227501 (+)
LP/J	ENSMUSG00230029182	pseudogene	Chr17:53415968-53416351 (+)
NOD/ShiLtJ	ENSMUSG00190018616	pseudogene	Chr17:49539033-49539416 (+)
NZO/HlLtJ	ENSMUSG00225044032	pseudogene	Chr17:55682850-55683233 (+)
PWK/PhJ	ENSLUMG00010037528	pseudogene	Chr17:49442907-49443290 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005024913	pseudogene	Chr17:50490939-50491322 (+)

Homology

• Gene Tree
  Mark1-ps2
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  6

• Ensembl
  ENSMUSG00000105075 (Evidence)
• NCBI Gene
  102637912

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105075	Ensembl Gene Model | MGI Sequence Detail	384	C57BL/6J
transcript	ENSMUST00000197823	Ensembl | MGI Sequence Detail	384	Not Applicable

Other
Accession IDs

MGI:3647187

References

• Summaries
  All 7
• Earliest
  J:91783 Caenepeel S, et al., The mouse kinome: discovery and comparative genomics of all mouse protein kinases. Proc Natl Acad Sci U S A. 2004 Aug 10;101(32):11707-12