Crb1-ps Pseudogene Detail

Summary

• Symbol
  Crb1-ps
• Name
  crumbs family member 1, photoreceptor morphogenesis associated, pseudogene
• Synonyms
  Gm16245

• Feature Type
  pseudogene
• IDs
  MGI:5645790
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:26096433-26097327 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 16.09 cM

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5645790	pseudogene	Chr14:26096433-26097327 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011088	pseudogene	Chr14:19332413-19333265 (-)
A/J	MGP_AJ_G0011084	pseudogene	Chr14:18573852-18574700 (-)
AKR/J	MGP_AKRJ_G0011041	pseudogene	Chr14:19589424-19590300 (-)
BALB/cJ	MGP_BALBcJ_G0011061	pseudogene	Chr14:18682023-18682871 (-)
C3H/HeJ	MGP_C3HHeJ_G0010959	pseudogene	Chr14:19454911-19455775 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011344	pseudogene	Chr14:20141911-20142743 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010776	pseudogene	Chr14:19063335-19064106 (-)
CBA/J	MGP_CBAJ_G0010932	pseudogene	Chr14:20978374-20979212 (-)
DBA/2J	MGP_DBA2J_G0010980	pseudogene	Chr14:18656326-18657154 (-)
FVB/NJ	MGP_FVBNJ_G0010989	pseudogene	Chr14:18619451-18620346 (-)
LP/J	MGP_LPJ_G0011064	pseudogene	Chr14:19603577-19604449 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010974	pseudogene	Chr14:20295944-20296770 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011326	pseudogene	Chr14:19363840-19364656 (-)
PWK/PhJ	MGP_PWKPhJ_G0010649	pseudogene	Chr14:18012493-18013474 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010471	pseudogene	Chr14:18835121-18835969 (-)
WSB/EiJ	MGP_WSBEiJ_G0010829	pseudogene	Chr14:19396890-19397754 (-)

Homology

• Gene Tree
  Crb1-ps
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000089978 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089978	Ensembl Gene Model | MGI Sequence Detail	895	C57BL/6J
transcript	ENSMUST00000160441	Ensembl | MGI Sequence Detail	895	Not Applicable

Other
Accession IDs

MGI:3801961

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;