Gm42205 Gene Detail

Summary

• Symbol
  Gm42205
• Name
  predicted gene, 42205
• Synonyms
  Gm43207

• Feature Type
  lncRNA gene
• IDs
  MGI:5625090
  NCBI Gene: 105247023
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:34652665-34674533 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  706 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5625090	lncRNA gene	Chr3:34652665-34674533 (-)
129S1/SvImJ	ENSMUSG00200006203	lncRNA gene	Chr3:31385043-31388772 (-)
A/J	ENSMUSG00195001417	lncRNA gene	Chr3:31382461-31386180 (-)
AKR/J	ENSMUSG00220000722	lncRNA gene	Chr3:31422024-31425754 (-)
BALB/cJ	ENSMUSG00180002866	lncRNA gene	Chr3:31504616-31508345 (-)
C3H/HeJ	ENSMUSG00175003831	lncRNA gene	Chr3:31412729-31416448 (-)
C57BL/6NJ	ENSMUSG00215001559	lncRNA gene	Chr3:31778634-31782363 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005596	lincRNA gene	Chr3:29514704-29518504 (-)
CAST/EiJ	ENSTCUG00005025563	lncRNA gene	Chr3:31266486-31270218 (-)
CBA/J	ENSMUSG00210001750	lncRNA gene	Chr3:31460947-31464666 (-)
DBA/2J	ENSMUSG00185001827	lncRNA gene	Chr3:31707881-31711610 (-)
FVB/NJ	ENSMUSG00205008775	lncRNA gene	Chr3:30885578-30889300 (-)
JF1/MsJ	ENSUMUG00000006038	lncRNA gene	Chr3:31149937-31153663 (-)
LP/J	ENSMUSG00230024504	lncRNA gene	Chr3:33628075-33631804 (-)
NOD/ShiLtJ	ENSMUSG00190001419	lncRNA gene	Chr3:31694684-31698414 (-)
NZO/HlLtJ	ENSMUSG00225007279	lncRNA gene	Chr3:36246091-36249821 (-)
PWK/PhJ	ENSLUMG00010037145	lncRNA gene	Chr3:31210814-31214540 (-)
SPRET/EiJ	ENSMSPG00010000953	lncRNA gene	Chr3:31585611-31589368 (-)
WSB/EiJ	ENSIUOG00005014264	lncRNA gene	Chr3:31706835-31710554 (-)

Homology

• Gene Tree
  Gm42205
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00000105222 (Evidence)
• NCBI Gene
  105247023

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105222	Ensembl Gene Model | MGI Sequence Detail	21869	C57BL/6J
transcript	ENSMUST00000272094	Ensembl | MGI Sequence Detail	882	Not Applicable

Other
Accession IDs

MGI:5663344

References

• Summaries
  All 6
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm42205:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32974	Chr3:34674527-34674530 (-)	4 bp