Gm41914 Gene Detail

Summary

• Symbol
  Gm41914
• Name
  predicted gene, 41914

• Feature Type
  lncRNA gene
• IDs
  MGI:5624799
  NCBI Gene: 105246657
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr1:89486971-89491251 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  206 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624799	lncRNA gene	Chr1:89482230-89508649 (-)
129S1/SvImJ	ENSMUSG00200038378	lncRNA gene	Chr1:86710810-86715094 (-)
A/J	ENSMUSG00195034140	lncRNA gene	Chr1:86271795-86276079 (-)
AKR/J	ENSMUSG00220046220	lncRNA gene	Chr1:86419997-86424281 (-)
BALB/cJ	ENSMUSG00180017897	lncRNA gene	Chr1:86583498-86587778 (-)
C3H/HeJ	ENSMUSG00175001679	lncRNA gene	Chr1:86455556-86459836 (-)
C57BL/6NJ	ENSMUSG00215037227	lncRNA gene	Chr1:86386321-86390601 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007989	lncRNA gene	Chr1:86033777-86038055 (-)
CBA/J	ENSMUSG00210012474	lncRNA gene	Chr1:86300869-86305147 (-)
DBA/2J	ENSMUSG00185017816	lncRNA gene	Chr1:90762206-90766484 (-)
FVB/NJ	ENSMUSG00205045238	lncRNA gene	Chr1:85702789-85707073 (-)
JF1/MsJ	ENSUMUG00000024927	lncRNA gene	Chr1:89524374-89528701 (-)
LP/J	ENSMUSG00230021160	lncRNA gene	Chr1:90047063-90051345 (-)
NOD/ShiLtJ	ENSMUSG00190036362	lncRNA gene	Chr1:86346086-86350370 (-)
NZO/HlLtJ	ENSMUSG00225004289	lncRNA gene	Chr1:93943267-93947549 (-)
PWK/PhJ	ENSLUMG00010048556	lncRNA gene	Chr1:85922744-85927027 (-)
SPRET/EiJ	ENSMSPG00010046694	lncRNA gene	Chr1:87945646-87949684 (-)
WSB/EiJ	ENSIUOG00005044278	lncRNA gene	Chr1:86010799-86015081 (-)

Homology

• Gene Tree
  Gm41914
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm41914
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  5

• Ensembl
  ENSMUSG00000121272 (Evidence)
• NCBI Gene
  105246657

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121272	Ensembl Gene Model | MGI Sequence Detail	4281	C57BL/6J
transcript	ENSMUST00000247690	Ensembl | MGI Sequence Detail	1765	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm41914:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr12900	Chr1:89491243-89491254 (-)	2 bp
Tssr12899	Chr1:89491225-89491235 (-)	21 bp