Gm41804 Gene Detail

Summary

• Symbol
  Gm41804
• Name
  predicted gene, 41804

• Feature Type
  lncRNA gene
• IDs
  MGI:5624689
  NCBI Gene: 105246529
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:8228272-8264537 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  741 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624689	lncRNA gene	Chr19:8228272-8296536 (+)
129S1/SvImJ	ENSMUSG00200052679	lncRNA gene	Chr19:4954944-5020154 (+)
A/J	ENSMUSG00195053690	lncRNA gene	Chr19:5356471-5421683 (+)
AKR/J	ENSMUSG00220050986	lncRNA gene	Chr19:5129716-5194927 (+)
BALB/cJ	ENSMUSG00180051870	lncRNA gene	Chr19:5720424-5785635 (+)
C3H/HeJ	ENSMUSG00175015315	lncRNA gene	Chr19:4994234-5059441 (+)
C57BL/6NJ	ENSMUSG00215047794	lncRNA gene	Chr19:5195390-5260598 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045219	lncRNA gene	Chr19:4826686-4871558 (+)
CBA/J	ENSMUSG00210050597	lncRNA gene	Chr19:4730076-4772763 (+)
CBA/J	ENSMUSG00210050598	lncRNA gene	Chr19:4981437-5006754 (+)
DBA/2J	ENSMUSG00185052967	lncRNA gene	Chr19:5351594-5419545 (+)
FVB/NJ	ENSMUSG00205053636	lncRNA gene	Chr19:5069881-5121307 (+)
JF1/MsJ	ENSUMUG00000056557	lncRNA gene	Chr19:5288053-5362463 (+)
LP/J	ENSMUSG00230054337	lncRNA gene	Chr19:6281629-6346840 (+)
NOD/ShiLtJ	ENSMUSG00190053143	lncRNA gene	Chr19:4890059-4955265 (+)
NZO/HlLtJ	ENSMUSG00225026993	lncRNA gene	Chr19:9990442-10055650 (+)
PWK/PhJ	ENSLUMG00010008729	lncRNA gene	Chr19:5031502-5107813 (+)
SPRET/EiJ	ENSMSPG00010051396	lncRNA gene	Chr19:4784760-4831401 (+)
WSB/EiJ	ENSIUOG00005051342	lncRNA gene	Chr19:4729930-4799845 (+)

Homology

• Gene Tree
  Gm41804
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000118280 (Evidence)
• NCBI Gene
  105246529

Representative Sequences			Length	Strain/Species
genomic	105246529	NCBI Gene Model | MGI Sequence Detail	36266	C57BL/6J
transcript	XR_877706	RefSeq | MGI Sequence Detail	11133	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;