Gm41792 Gene Detail

Summary

• Symbol
  Gm41792
• Name
  predicted gene, 41792

• Feature Type
  lncRNA gene
• IDs
  MGI:5624677
  NCBI Gene: 105246511
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:81672457-81680866 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  389 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624677	lncRNA gene	Chr18:81661273-81680962 (-)
129S1/SvImJ	ENSMUSG00200030523	lncRNA gene	Chr18:78879586-78889478 (-)
A/J	ENSMUSG00195005165	lncRNA gene	Chr18:78981090-78990993 (-)
AKR/J	ENSMUSG00220017739	lncRNA gene	Chr18:78906260-78916149 (-)
BALB/cJ	ENSMUSG00180013489	lncRNA gene	Chr18:79551380-79561287 (-)
C3H/HeJ	ENSMUSG00175012717	lncRNA gene	Chr18:79091753-79101646 (-)
C57BL/6NJ	ENSMUSG00215028756	lncRNA gene	Chr18:78453960-78463866 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028726	lncRNA gene	Chr18:78005975-78015990 (-)
CBA/J	ENSMUSG00210035043	lncRNA gene	Chr18:79042212-79052107 (-)
DBA/2J	ENSMUSG00185012105	lncRNA gene	Chr18:78947504-78957397 (-)
FVB/NJ	ENSMUSG00205017136	lncRNA gene	Chr18:78355497-78365404 (-)
JF1/MsJ	ENSUMUG00000035383	lncRNA gene	Chr18:78841789-78851978 (-)
LP/J	ENSMUSG00230013482	lncRNA gene	Chr18:80985819-80995711 (-)
NOD/ShiLtJ	ENSMUSG00190023403	lncRNA gene	Chr18:78754904-78764797 (-)
NZO/HlLtJ	ENSMUSG00225034489	lncRNA gene	Chr18:80863748-80873641 (-)
PWK/PhJ	ENSLUMG00010007197	lncRNA gene	Chr18:79230541-79240738 (-)
SPRET/EiJ	ENSMSPG00010009060	lncRNA gene	Chr18:79604264-79614132 (-)
WSB/EiJ	ENSIUOG00005007791	lncRNA gene	Chr18:78407177-78417071 (-)

Homology

• Gene Tree
  Gm41792
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving Gm41792
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000117870 (Evidence)
• NCBI Gene
  105246511

Representative Sequences			Length	Strain/Species
genomic	105246511	NCBI Gene Model | MGI Sequence Detail	8410	C57BL/6J
transcript	XR_877611	RefSeq | MGI Sequence Detail	911	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:175597 Overbeek PA, Direct Data Submission for Overbeek Lentiviral Transgenic Lines. MGI Direct Data Submission. 2011;