Gm41787 Gene Detail

Summary

• Symbol
  Gm41787
• Name
  predicted gene, 41787

• Feature Type
  lncRNA gene
• IDs
  MGI:5624672
  NCBI Gene: 105246505
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:80201134-80204714 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624672	lncRNA gene	Chr18:80201127-80205989 (-)
129S1/SvImJ	ENSMUSG00200028817	lncRNA gene	Chr18:77418416-77423034 (-)
A/J	ENSMUSG00195004841	lncRNA gene	Chr18:77502290-77506923 (-)
AKR/J	ENSMUSG00220017962	lncRNA gene	Chr18:77446089-77450583 (-)
BALB/cJ	ENSMUSG00180013457	lncRNA gene	Chr18:78072538-78077157 (-)
C3H/HeJ	ENSMUSG00175012993	lncRNA gene	Chr18:77618242-77622873 (-)
C57BL/6NJ	ENSMUSG00215029933	lncRNA gene	Chr18:76980465-76985100 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028421	lncRNA gene	Chr18:76532433-76538659 (-)
CBA/J	ENSMUSG00210037024	lncRNA gene	Chr18:77568833-77573468 (-)
DBA/2J	ENSMUSG00185012071	lncRNA gene	Chr18:77474067-77478706 (-)
FVB/NJ	ENSMUSG00205018538	lncRNA gene	Chr18:76894556-76899523 (-)
JF1/MsJ	ENSUMUG00000039312	lncRNA gene	Chr18:77384367-77388869 (-)
LP/J	ENSMUSG00230013489	lncRNA gene	Chr18:79524749-79529362 (-)
NOD/ShiLtJ	ENSMUSG00190023996	lncRNA gene	Chr18:77274643-77279264 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010007102	lncRNA gene	Chr18:77768036-77772582 (-)
SPRET/EiJ	ENSMSPG00010009368	lncRNA gene	Chr18:78126001-78132581 (-)
WSB/EiJ	ENSIUOG00005008230	lncRNA gene	Chr18:76950781-76955404 (-)

Homology

• Gene Tree
  Gm41787
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving Gm41787
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000118373 (Evidence)
• NCBI Gene
  105246505

Representative Sequences			Length	Strain/Species
genomic	105246505	NCBI Gene Model | MGI Sequence Detail	3581	C57BL/6J
transcript	XR_877597	RefSeq | MGI Sequence Detail	345	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:175597 Overbeek PA, Direct Data Submission for Overbeek Lentiviral Transgenic Lines. MGI Direct Data Submission. 2011;